[PDF][PDF] Analysis of codon usage
JF Peden - 2000 - Citeseer
The genetic code uses 64 codons to represent the 20 standard amino acids and the
translation termination signal. Each codon is recognised by a subset of a cell's transfer …
translation termination signal. Each codon is recognised by a subset of a cell's transfer …
The SWISS-PROT protein sequence data bank and its new supplement TREMBL
A Bairoch, R Apweiler - Nucleic acids research, 1996 - academic.oup.com
SWISS-PROT is a curated protein sequence database which strives to provide a high level
of annotation (such as the description of the function of a protein, its domain structure, post …
of annotation (such as the description of the function of a protein, its domain structure, post …
Human carbonic anhydrase XII: cDNA cloning, expression, and chromosomal localization of a carbonic anhydrase gene that is overexpressed in some renal cell …
We report the cloning and characterization of a tumor-associated carbonic anhydrase (CA)
that was identified in a human renal cell carcinoma (RCC) by serological expression …
that was identified in a human renal cell carcinoma (RCC) by serological expression …
The ribosomal database project (RDP)
BL Maidak, GJ Olsen, N Larsen… - Nucleic acids …, 1996 - academic.oup.com
Abstract The Ribosomal Database Project (RDP) is a curated database that offers ribosome-
related data, analysis services and associated computer programs. The offerings include …
related data, analysis services and associated computer programs. The offerings include …
[10] Entrez: Molecular biology database and retrieval system
GD Schuler, JA Epstein, H Ohkawa, JA Kans - Methods in enzymology, 1996 - Elsevier
Publisher Summary Entrez is a biomedical information resource that has been designed to
facilitate the discovery process by providing connections among biological sequences …
facilitate the discovery process by providing connections among biological sequences …
Molecular definition of a novel human galectin which is immunogenic in patients with Hodgkin's disease
Ö Türeci, H Schmitt, N Fadle, M Pfreundschuh… - Journal of Biological …, 1997 - ASBMB
Using autologous serum for the immunoscreening of a cDNA expression library derived from
tissue involved by Hodgkin's disease, a new 36-kDa protein with the characteristics of …
tissue involved by Hodgkin's disease, a new 36-kDa protein with the characteristics of …
The EMBL nucleotide sequence database
G Stoesser, W Baker, A van den Broek… - Nucleic acids …, 2002 - academic.oup.com
Abstract The EMBL Nucleotide Sequence Database (aka EMBL-Bank; http://www. ebi. ac.
uk/embl/) incorporates, organises and distributes nucleotide sequences from all available …
uk/embl/) incorporates, organises and distributes nucleotide sequences from all available …
Simple sequence repeats in the Helicobacter pylori genome
NJ Saunders, JF Peden, DW Hood… - Molecular …, 1998 - Wiley Online Library
We describe an integrated system for the analysis of DNA sequence motifs within complete
bacterial genome sequences. This system is based around ACeDB, a genome database …
bacterial genome sequences. This system is based around ACeDB, a genome database …
The PROSITE database, its status in 1995
The PROSITE database consists of biologically significant patterns and profiles formulated
in such a way that with appropriate computational tools it can help to determine to which …
in such a way that with appropriate computational tools it can help to determine to which …
Screening for genetic diversity of isolates of anaerobic Fe (II)-oxidizing bacteria using DGGE and whole-cell hybridization
BEE Buchholz-Cleven, B Rattunde… - Systematic and Applied …, 1997 - Elsevier
Nitrate-reducing bacteria, which grow anaerobically with Fe (II) as electron donor, were
isolated from freshwater mud samples. Since extensive phylogenetic and physiological …
isolated from freshwater mud samples. Since extensive phylogenetic and physiological …