The complex Rcs regulatory cascade
E Wall, N Majdalani, S Gottesman - Annual review of …, 2018 - annualreviews.org
RcsB, a response regulator of the FixJ/NarL family, is at the center of a complex network of
regulatory inputs and outputs. Cell surface stress is sensed by an outer membrane …
regulatory inputs and outputs. Cell surface stress is sensed by an outer membrane …
[HTML][HTML] Model-driven insights into the effects of temperature on metabolism
P Wendering, Z Nikoloski - Biotechnology Advances, 2023 - Elsevier
Temperature affects cellular processes at different spatiotemporal scales, and identifying the
genetic and molecular mechanisms underlying temperature responses paves the way to …
genetic and molecular mechanisms underlying temperature responses paves the way to …
Robustness encoded across essential and accessory replicons of the ecologically versatile bacterium Sinorhizobium meliloti
Bacterial genome evolution is characterized by gains, losses, and rearrangements of
functional genetic segments. The extent to which large-scale genomic alterations influence …
functional genetic segments. The extent to which large-scale genomic alterations influence …
[HTML][HTML] An inducible transposon mutagenesis approach for the intracellular human pathogen Chlamydia trachomatis
CE O'Neill, RJ Skilton, J Forster, DW Cleary… - Wellcome open …, 2021 - ncbi.nlm.nih.gov
Background: Chlamydia trachomatis is a prolific human pathogen that can cause serious
long-term conditions if left untreated. Recent developments in Chlamydia genetics have …
long-term conditions if left untreated. Recent developments in Chlamydia genetics have …
Inhibiting the reproduction of SARS-CoV-2 through perturbations in human lung cell metabolic network
H Delattre, K Sasidharan, OS Soyer - Life science alliance, 2021 - life-science-alliance.org
Viruses rely on their host for reproduction. Here, we made use of genomic and structural
information to create a biomass function capturing the amino and nucleic acid requirements …
information to create a biomass function capturing the amino and nucleic acid requirements …
Novel genes required for the fitness of Streptococcus pyogenes in human saliva
Streptococcus pyogenes (group A streptococcus [GAS]) causes 600 million cases of
pharyngitis each year. Despite this considerable disease burden, the molecular …
pharyngitis each year. Despite this considerable disease burden, the molecular …
Yersiniomics, a Multi-Omics Interactive Database for Yersinia Species
The genus Yersinia includes a large variety of nonpathogenic and life-threatening
pathogenic bacteria, which cause a broad spectrum of diseases in humans and animals …
pathogenic bacteria, which cause a broad spectrum of diseases in humans and animals …
[HTML][HTML] Fragment-based target screening as an empirical approach to prioritising targets: a case study on antibacterials
P Canning, K Birchall, CA Kettleborough, A Merritt… - Drug Discovery …, 2020 - Elsevier
Here, we describe a novel workflow combining informatic and experimental approaches to
enable evidence-based prioritising of targets from large sets in parallel. High-throughput …
enable evidence-based prioritising of targets from large sets in parallel. High-throughput …
Tn-Core: a toolbox for integrating Tn-seq gene essentiality data and constraint-based metabolic modeling
The design of synthetic cells requires a detailed understanding of the relevance of genes
and gene networks underlying complex cellular phenotypes. Transposon-sequencing (Tn …
and gene networks underlying complex cellular phenotypes. Transposon-sequencing (Tn …
PsaF Is a Membrane-Localized pH Sensor That Regulates psaA Expression in Yersinia pestis
JD Quinn, EH Weening, VL Miller - Journal of Bacteriology, 2021 - Am Soc Microbiol
The Yersinia pestis pH 6 antigen (PsaA) forms fimbria-like structures and is required for full
virulence during bubonic plague. High temperature and low pH regulate PsaA production …
virulence during bubonic plague. High temperature and low pH regulate PsaA production …