Improving de novo molecule generation for structure-based drug design

M Thomas - 2024 - repository.cam.ac.uk
De novo molecule generation for drug design has seen a resurgence in recent years, mostly
due to the rapid advances in machine learning (ML) algorithms that utilise deep neural …

Structure-based methods in drug design

L Guruprasad, P Andola, A Banerjee, D Laxman… - … , QSAR and Machine …, 2023 - Elsevier
Drug discovery using traditional methods is expensive on resources. Advances in algorithms
for computational methods toward solving problems in chemical biology and affordable …

Algoritmos genéticos aplicados ao planejamento racional termodinâmico de anticorpos miméticos baseados no domínio GB1 da proteína G estreptocócica: um …

AA Espirito Santo - 2024 - repositorio.unesp.br
O desenvolvimento de anticorpos miméticos (AM), capazes de combinar a elevada
afinidade e seletividade dos anticorpos com o pequeno tamanho dos peptídeos, tem um …

Fragmenstein: predicting protein-ligand structures of compounds derived from known crystallographic fragment hits using a strict conserved-binding–based …

MP Ferla, R Sánchez-García, RE Skyner, S Gahbauer… - 2024 - chemrxiv.org
Current strategies centred on either merging or linking initial hits from fragment-based drug
design (FBDD) crystallographic screens ignore 3D structural information. We show that an …

Critical Assessment of Generative Models for de Novo Molecular Structure Generation

T Miyao - Journal of Computer Aided Chemistry, 2023 - jstage.jst.go.jp
Deep generative models can virtually generate chemical structures with desired properties.
These models are widely used in de-novo molecular design projects, and are becoming an …

A Way for Finding Ligands for New Binding Sites

KA Shcherbakov, AV Veselovsky - Biomedical Chemistry: Research …, 2023 - bmc-rm.org
Abstract Analysis of protein structures shows that most of them have potential binding sites
that may be considered as applicable for new ligand design. The lack of known ligands …

[PDF][PDF] Artificial Intelligence Uncovers Evolutionarily Conserved Intracellular Allosteric Modulators of GPCR-Gα Interface

S Mohanty, A Mittal, A Gaur, S Solanki, S Kumar… - 2023 - assets-eu.researchsquare.com
Traditionally, the exogenous allosteric modulators of G protein-coupled receptors (GPCRs)
have been extensively investigated due to their pharmacological signi cance. However, to …

Simulations de dynamique moléculaire à haute résolution des isoformes 1 et 2 de la pyruvate kinase musculaire

Q Delobelle - 2024 - theses.hal.science
Le métabolisme glycolytique joue un rôle essentiel dans les processus physiologiques
normaux et dans la croissance des cellules cancéreuses. Les isoformes 1 et 2 de la …

In Silico Screening and Evolution of Promising Novel Anti-Virulents Against Salmonella ATPase

L Xu, N Shen - 2023 - chemrxiv.org
Our current treatments for bacterial infections are under threat by the growth of antibiotic
resistance in many different pathogens. Of these pathogens, Salmonella is a particularly …

Computergestützte Methoden in der Arzneimittel-Repositionierung und der Naturstoffbasierten Wirkstoffforschung

R Abel - 2023 - refubium.fu-berlin.de
Seit einigen Jahrzehnten werden bei der Entwicklung und Repositionierung von
Arzneimitteln rechenintensive computergestützte Methoden eingesetzt, insbesondere da …