[HTML][HTML] The State of “Omics” Research for Farmed Penaeids: Advances in Research and Impediments to Industry Utilization

JL Guppy, DB Jones, DR Jerry, NM Wade… - Frontiers in …, 2018 - frontiersin.org
Elucidating the underlying genetic drivers of production traits in agricultural and aquaculture
species is critical to efforts to maximize farming efficiency.“Omics” based methods (ie …

[HTML][HTML] Genome-wide analysis reveals genomic diversity and signatures of selection in Qinchuan beef cattle

H Yu, K Zhang, G Cheng, C Mei, H Wang, L Zan - BMC genomics, 2024 - Springer
Abstract Background Indigenous Chinese cattle have abundant genetic diversity and a long
history of artificial selection, giving local breeds advantages in adaptability, forage tolerance …

[HTML][HTML] Population structure, and selection signatures underlying high-altitude adaptation inferred from genome-wide copy number variations in Chinese indigenous …

Y Zhang, Y Hu, X Wang, Q Jiang, H Zhao… - Frontiers in …, 2020 - frontiersin.org
Copy number variations (CNVs) have been demonstrated as crucial substrates for evolution,
adaptation and breed formation. Chinese indigenous cattle breeds exhibit a broad …

[HTML][HTML] Zoometric characterization of creole cows from the Southern Amazon region of Peru

R Encina Ruiz, JA Saucedo-Uriarte… - Diversity, 2021 - mdpi.com
Bovine breeding began in Peru more than five centuries ago; since then, adaptation has
started. Nowadays, Creole cattle are part of economic activities of Peruvian farmers, as they …

[HTML][HTML] Genomic sequencing analysis reveals copy number variations and their associations with economically important traits in beef cattle

L Yang, Q Niu, T Zhang, G Zhao, B Zhu, Y Chen… - Genomics, 2021 - Elsevier
Copy number variation (CNV) represents a major source of genetic variation, which may
have potentially large effects, including alternating gene regulation and dosage, as well as …

[HTML][HTML] Genome-wide analysis of CNVs in three populations of Tibetan sheep using whole-genome resequencing

L Hu, L Zhang, Q Li, H Liu, T Xu, N Zhao, X Han… - Frontiers in …, 2022 - frontiersin.org
Copy number variation (CNV), an important source of genomic structural variation, can
disturb genetic structure, dosage, regulation and expression, and is associated with …

[HTML][HTML] Survey of allele specific expression in bovine muscle

GM Guillocheau, A El Hou, C Meersseman… - Scientific Reports, 2019 - nature.com
Allelic imbalance is a common phenomenon in mammals that plays an important role in
gene regulation. An Allele Specific Expression (ASE) approach can be used to detect …

Novel copy number variation of the KLF3 gene is associated with growth traits in beef cattle

JW Xu, L Zheng, LJ Li, Y Yao, H Hua, SZ Yang, YF Wen… - Gene, 2019 - Elsevier
Copy number variation (CNV) related to complex traits, such as disease and quantitative
phenotype, is considered an important and wealthy source of genetic and phenotypic …

[HTML][HTML] Integrating genome-wide CNVs into QTLs and high confidence GWAScore regions identified positional candidates for sheep economic traits

J Cheng, X Cao, Q Hanif, L Pi, L Hu, Y Huang… - Frontiers in …, 2020 - frontiersin.org
Copy number variations (CNVs) are important source of genetic variation, which can affect
diverse economic traits through a variety of mechanisms. In addition, genome scan can …

Copy number variation of the CCDC39 gene is associated with growth traits in Chinese cattle

L Hu, J Yu, R Huang, P Yang, Z Zhang… - Veterinary Medicine …, 2022 - Wiley Online Library
Background Copy number variation (CNV) has become an essential part of genetic
structural variation. Coiled‐coil domain containing 39 (CCDC39) is a gene that related to the …