Innovations in genomics and big data analytics for personalized medicine and health care: A review

M Hassan, FM Awan, A Naz… - International journal of …, 2022 - mdpi.com
Big data in health care is a fast-growing field and a new paradigm that is transforming case-
based studies to large-scale, data-driven research. As big data is dependent on the …

[HTML][HTML] DNA methylation in the pathogenesis of type 2 diabetes in humans

C Davegårdh, S García-Calzón, K Bacos, C Ling - Molecular metabolism, 2018 - Elsevier
Abstract Background Type 2 diabetes (T2D) is a multifactorial, polygenic disease caused by
impaired insulin secretion and insulin resistance. Genome-wide association studies (GWAS) …

Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project

EA Lopera-Maya, A Kurilshikov, A van der Graaf, S Hu… - Nature …, 2022 - nature.com
Host genetics are known to influence the gut microbiome, yet their role remains poorly
understood. To robustly characterize these effects, we performed a genome-wide …

Genetic variation influencing DNA methylation provides insights into molecular mechanisms regulating genomic function

JS Hawe, R Wilson, KT Schmid, L Zhou… - Nature …, 2022 - nature.com
We determined the relationships between DNA sequence variation and DNA methylation
using blood samples from 3,799 Europeans and 3,195 South Asians. We identify …

[HTML][HTML] The transcriptional landscape of age in human peripheral blood

MJ Peters, R Joehanes, LC Pilling… - Nature …, 2015 - nature.com
Disease incidences increase with age, but the molecular characteristics of ageing that lead
to increased disease susceptibility remain inadequately understood. Here we perform a …

Disease variants alter transcription factor levels and methylation of their binding sites

MJ Bonder, R Luijk, DV Zhernakova, M Moed… - Nature …, 2017 - nature.com
Most disease-associated genetic variants are noncoding, making it challenging to design
experiments to understand their functional consequences,. Identification of expression …

Silencing hepatic MCJ attenuates non-alcoholic fatty liver disease (NAFLD) by increasing mitochondrial fatty acid oxidation

L Barbier-Torres, KA Fortner, P Iruzubieta… - Nature …, 2020 - nature.com
Nonalcoholic fatty liver disease (NAFLD) is considered the next major health epidemic with
an estimated 25% worldwide prevalence. No drugs have yet been approved and NAFLD …

Exploring the genetic basis of human population differences in DNA methylation and their causal impact on immune gene regulation

LT Husquin, M Rotival, M Fagny, H Quach, N Zidane… - Genome biology, 2018 - Springer
Background DNA methylation is influenced by both environmental and genetic factors and is
increasingly thought to affect variation in complex traits and diseases. Yet, the extent of …

Genotype harmonizer: automatic strand alignment and format conversion for genotype data integration

P Deelen, MJ Bonder, KJ Van Der Velde, HJ Westra… - BMC research …, 2014 - Springer
Background To gain statistical power or to allow fine mapping, researchers typically want to
pool data before meta-analyses or genotype imputation. However, the necessary …

Human ontogeny of drug transporters: review and recommendations of the pediatric transporter working group

KLR Brouwer, LM Aleksunes, B Brandys… - Clinical …, 2015 - Wiley Online Library
The critical importance of membrane‐bound transporters in pharmacotherapy is widely
recognized, but little is known about drug transporter activity in children. In this white paper …