Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
Perspectives and benefits of high-throughput long-read sequencing in microbial ecology
Short-read, high-throughput sequencing (HTS) methods have yielded numerous important
insights into microbial ecology and function. Yet, in many instances short-read HTS …
insights into microbial ecology and function. Yet, in many instances short-read HTS …
High-throughput sequencing view on the magnitude of global fungal diversity
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
Do all fungi have ancestors with endophytic lifestyles?
Fungi are an essential component of any ecosystem and have diverse ecological roles,
ranging from endophytes to epiphytes and pathogens to saprobes. The current estimate of …
ranging from endophytes to epiphytes and pathogens to saprobes. The current estimate of …
Taxonomic and phylogenetic contributions to Celtis formosana, Ficus ampelas, F. septica, Macaranga tanarius and Morus australis leaf litter inhabiting microfungi
DS Tennakoon, CH Kuo, SSN Maharachchikumbura… - Fungal Diversity, 2021 - Springer
This article provides descriptions and illustrations of microfungi associated with the leaf litter
of Celtis formosana, Ficus ampelas, F. septica, Macaranga tanarius and Morus australis …
of Celtis formosana, Ficus ampelas, F. septica, Macaranga tanarius and Morus australis …
The Global Soil Mycobiome consortium dataset for boosting fungal diversity research
Fungi are highly important biotic components of terrestrial ecosystems, but we still have a
very limited understanding about their diversity and distribution. This data article releases a …
very limited understanding about their diversity and distribution. This data article releases a …
Forecasting the number of species of asexually reproducing fungi (Ascomycota and Basidiomycota)
Asexually reproducing fungi play a significant role in essential processes in managed and
wild ecosystems such as nutrients cycling and multitrophic interactions. A large number of …
wild ecosystems such as nutrients cycling and multitrophic interactions. A large number of …
[HTML][HTML] How, not if, is the question mycologists should be asking about DNA-based typification
Abstract Fungal metabarcoding of substrates such as soil, wood, and water is uncovering
an unprecedented number of fungal species that do not seem to produce tangible …
an unprecedented number of fungal species that do not seem to produce tangible …
PacBio sequencing of Glomeromycota rDNA: a novel amplicon covering all widely used ribosomal barcoding regions and its applicability in taxonomy and ecology of …
Z Kolaříková, R Slavíková, C Krüger, M Krüger… - New …, 2021 - Wiley Online Library
There is no consensus barcoding region for determination of arbuscular mycorrhizal fungal
(AMF) taxa. To overcome this obstacle, we have developed an approach to sequence an …
(AMF) taxa. To overcome this obstacle, we have developed an approach to sequence an …
[HTML][HTML] New-generation sequencing technology in diagnosis of fungal plant pathogens: a dream comes true?
M Aragona, A Haegi, MT Valente, L Riccioni, L Orzali… - Journal of Fungi, 2022 - mdpi.com
The fast and continued progress of high-throughput sequencing (HTS) and the drastic
reduction of its costs have boosted new and unpredictable developments in the field of plant …
reduction of its costs have boosted new and unpredictable developments in the field of plant …