Modeling of MT. P495, an mRNA-based vaccine against the phosphate-binding protein PstS1 of Mycobacterium tuberculosis
S Shahrear, ABMMK Islam - Molecular Diversity, 2023 - Springer
Tuberculosis (TB) is a contagious disease that predominantly affects the lungs, but can also
spread to other organs via the bloodstream. TB affects about one-fourth population of the …
spread to other organs via the bloodstream. TB affects about one-fourth population of the …
ERAP2 increases the abundance of a peptide submotif highly selective for the birdshot uveitis-associated HLA-A29
WJ Venema, S Hiddingh, JH de Boer… - Frontiers in …, 2021 - frontiersin.org
Birdshot Uveitis (BU) is a blinding inflammatory eye condition that only affects HLA-A29-
positive individuals. Genetic association studies linked ERAP2 with BU, an aminopeptidase …
positive individuals. Genetic association studies linked ERAP2 with BU, an aminopeptidase …
HIV peptidome-wide association study reveals patient-specific epitope repertoires associated with HIV control
J Arora, PJ McLaren, N Chaturvedi… - Proceedings of the …, 2019 - National Acad Sciences
Genetic variation in the peptide-binding groove of the highly polymorphic HLA class I
molecules has repeatedly been associated with HIV-1 control and progression to AIDS …
molecules has repeatedly been associated with HIV-1 control and progression to AIDS …
Designing string-of-beads vaccines with optimal spacers
B Schubert, O Kohlbacher - Genome medicine, 2016 - Springer
String-of-beads polypeptides allow convenient delivery of epitope-based vaccines. The
success of a polypeptide relies on efficient processing: constituent epitopes need to be …
success of a polypeptide relies on efficient processing: constituent epitopes need to be …
Not all T cell epitopes are equally desired: a review of in silico tools for the prediction of cytokine-inducing potential of T-cell epitopes
Assessment of protective or harmful T cell response induced by any antigenic epitope is
important in designing any immunotherapeutic molecule. The understanding of cytokine …
important in designing any immunotherapeutic molecule. The understanding of cytokine …
Designing a novel multiepitope peptide vaccine against melanoma using immunoinformatics approach
Z Yazdani, A Rafiei, H Irannejad… - Journal of …, 2022 - Taylor & Francis
Malignant melanoma is the most aggressive and life-threaten skin cancer. Nowadays, the
prevention and treatment of melanoma are challenging areas for researchers and …
prevention and treatment of melanoma are challenging areas for researchers and …
Accurate TCR-pMHC interaction prediction using a BERT-based transfer learning method
J Zhang, W Ma, H Yao - Briefings in Bioinformatics, 2024 - academic.oup.com
Accurate prediction of TCR-pMHC binding is important for the development of cancer
immunotherapies, especially TCR-based agents. Existing algorithms often experience …
immunotherapies, especially TCR-based agents. Existing algorithms often experience …
CRESSP: a comprehensive pipeline for prediction of immunopathogenic SARS-CoV-2 epitopes using structural properties of proteins
H An, M Eun, J Yi, J Park - Briefings in Bioinformatics, 2022 - academic.oup.com
The development of autoimmune diseases following SARS-CoV-2 infection, including
multisystem inflammatory syndrome, has been reported, and several mechanisms have …
multisystem inflammatory syndrome, has been reported, and several mechanisms have …
[HTML][HTML] The impact of human leukocyte antigen (HLA) micropolymorphism on ligand specificity within the HLA-B* 41 allotypic family
C Bade-Döding, A Theodossis, S Gras… - …, 2011 - ncbi.nlm.nih.gov
Background Polymorphic differences between human leukocyte antigen (HLA) molecules
affect the specificity and conformation of their bound peptides and lead to differential …
affect the specificity and conformation of their bound peptides and lead to differential …
Reverse vaccinology: the pathway from genomes and epitope predictions to tailored recombinant vaccines
In this chapter, we review the computational approaches that have led to a new generation
of vaccines in recent years. There are many alternative routes to develop vaccines based on …
of vaccines in recent years. There are many alternative routes to develop vaccines based on …