Towards explainable interaction prediction: Embedding biological hierarchies into hyperbolic interaction space

D Pogány, P Antal - Plos one, 2024 - journals.plos.org
Given the prolonged timelines and high costs associated with traditional approaches,
accelerating drug development is crucial. Computational methods, particularly drug-target …

Improving structure-based protein-ligand affinity prediction by graph representation learning and ensemble learning

J Guo - Plos one, 2024 - journals.plos.org
Predicting protein-ligand binding affinity presents a viable solution for accelerating the
discovery of new lead compounds. The recent widespread application of machine learning …

BindingSiteDTI: differential-scale binding site modelling for drug–target interaction prediction

F Pan, C Yin, SQ Liu, T Huang, Z Bian, PC Yuen - Bioinformatics, 2024 - academic.oup.com
Motivation Enhanced by contemporary computational advances, the prediction of drug–
target interactions (DTIs) has become crucial in developing de novo and effective drugs …

Multi source deep learning method for drug-protein interaction prediction using k-mers and chaos game representation

HA Mesrabadi, K Faez, J Pirgazi - Chemometrics and Intelligent Laboratory …, 2024 - Elsevier
Identification of drug-protein interactions plays an important role in drug discovery.
Development of new calculation methods, which have high accuracy solve the problems …

Drug-Protein Interactions Prediction Models Using Feature Selection and Classification Techniques

T Idhaya, A Suruliandi, SP Raja - Current Drug Metabolism, 2023 - ingentaconnect.com
Background: Drug-Protein Interaction (DPI) identification is crucial in drug discovery. The
high dimensionality of drug and protein features poses challenges for accurate interaction …

Fair molecular feature selection unveils universally tumor lineage-informative methylation sites in colorectal cancer

XC Li, Y Liu, AA Schaffer, S Mount, SC Sahinalp - bioRxiv, 2024 - biorxiv.org
In the era of precision medicine, performing comparative analysis over diverse patient
populations is a fundamental step towards tailoring healthcare interventions. However, the …

Drug Discovery with Machine Learning: Target Identification using Random Forest

P Choudhari, R Rawat, RR Al-Fatlawy… - 2024 International …, 2024 - ieeexplore.ieee.org
The abstract presents a see into our inquiry about on-target distinguishing proof in sedate
disclosure utilizing Random Forest, displaying the transformative effect of machine learning …