Splicing and transcription touch base: co-transcriptional spliceosome assembly and function

L Herzel, DSM Ottoz, T Alpert… - Nature reviews Molecular …, 2017 - nature.com
Several macromolecular machines collaborate to produce eukaryotic messenger RNA. RNA
polymerase II (Pol II) translocates along genes that are up to millions of base pairs in length …

[PDF][PDF] Knowing when to stop: transcription termination on protein-coding genes by eukaryotic RNAPII

JB Rodríguez-Molina, S West, LA Passmore - Molecular cell, 2023 - cell.com
Gene expression is controlled in a dynamic and regulated manner to allow for the consistent
and steady expression of some proteins as well as the rapidly changing production of other …

Small nucleolar RNAs tell a different tale

J Kufel, P Grzechnik - Trends in Genetics, 2019 - cell.com
Transcribing RNA Polymerase II interacts with multiple factors that orchestrate maturation
and stabilisation of messenger RNA. For the majority of noncoding RNAs, the polymerase …

[PDF][PDF] Control of RNA Pol II speed by PNUTS-PP1 and Spt5 dephosphorylation facilitates termination by a “sitting duck torpedo” mechanism

MA Cortazar, RM Sheridan, B Erickson, N Fong… - Molecular cell, 2019 - cell.com
Control of transcription speed, which influences many co-transcriptional processes, is poorly
understood. We report that PNUTS-PP1 phosphatase is a negative regulator of RNA …

[PDF][PDF] Integrator is a genome-wide attenuator of non-productive transcription

S Lykke-Andersen, K Žumer, EŠ Molska, JO Rouvière… - Molecular cell, 2021 - cell.com
Termination of RNA polymerase II (RNAPII) transcription in metazoans relies largely on the
cleavage and polyadenylation (CPA) and integrator (INT) complexes originally found to act …

[PDF][PDF] SPT5 stabilizes RNA polymerase II, orchestrates transcription cycles, and maintains the enhancer landscape

S Hu, L Peng, C Xu, Z Wang, A Song, FX Chen - Molecular Cell, 2021 - cell.com
Transcription progression is governed by multitasking regulators including SPT5, an
evolutionarily conserved factor implicated in virtually all transcriptional steps from enhancer …

A unified allosteric/torpedo mechanism for transcriptional termination on human protein-coding genes

JD Eaton, L Francis, L Davidson… - Genes & …, 2020 - genesdev.cshlp.org
The allosteric and torpedo models have been used for 30 yr to explain how transcription
terminates on protein-coding genes. The former invokes termination via conformational …

Termination of transcription by RNA polymerase II: BOOM!

JD Eaton, S West - Trends in Genetics, 2020 - cell.com
RNA polymerase II (Pol II) transcribes hundreds of thousands of transcription units–a
reaction always brought to a close by its termination. Because Pol II transcribes multiple …

Structure of a transcribing RNA polymerase II–DSIF complex reveals a multidentate DNA–RNA clamp

C Bernecky, JM Plitzko, P Cramer - Nature structural & molecular …, 2017 - nature.com
During transcription, RNA polymerase II (Pol II) associates with the conserved elongation
factor DSIF. DSIF renders the elongation complex stable and functions during Pol II pausing …

The pausing zone and control of RNA polymerase II elongation by Spt5: implications for the pause-release model

N Fong, RM Sheridan, S Ramachandran, DL Bentley - Molecular cell, 2022 - cell.com
The pause-release model of transcription proposes that 40–100 bases from the start site
RNA Pol II pauses, followed by release into productive elongation. Pause release is …