Mutation rate heterogeneity at the sub-gene scale due to local DNA hypomethylation

D Mas-Ponte, F Supek - Nucleic Acids Research, 2024 - academic.oup.com
Local mutation rates in human are highly heterogeneous, with known variability at the scale
of megabase-sized chromosomal domains, and, on the other extreme, at the scale of …

Discovery of novel tranylcypromine-based derivatives as LSD1 inhibitors for gastric cancer treatment

QS Ma, YF Zhang, CY Li, WX Zhang, L Yuan… - European Journal of …, 2023 - Elsevier
As an important epigenetic regulator, histone lysine specific demethylase 1 (LSD1) has
become an attractive target for the discovery of anticancer agents. In this work, a series of …

[HTML][HTML] Emerging roles of interactions between ncRNAs and other epigenetic modifications in breast cancer

J Xie, L Gan, B Xue, X Wang, X Pei - Frontiers in Oncology, 2023 - ncbi.nlm.nih.gov
Up till the present moment, breast cancer is still the leading cause of cancer-related death in
women worldwide. Although the treatment methods and protocols for breast cancer are …

Tankyrase-1 regulates RBP-mediated mRNA turnover to promote muscle fiber formation

S Mubaid, BJ Sanchez, RA Algehani… - Nucleic Acids …, 2024 - academic.oup.com
Abstract Poly (ADP-ribosylation)(PARylation) is a post-translational modification mediated
by a subset of ADP-ribosyl transferases (ARTs). Although PARylation-inhibition based …

Intergenerational perioperative neurocognitive disorder

LS Ju, TE Morey, CN Seubert, AE Martynyuk - Biology, 2023 - mdpi.com
Simple Summary Hundreds of millions of patients of all ages undergo general anesthesia for
surgery or periods of sedation each year, making the adverse effects of general anesthesia …

PacBio sequencing of human fecal samples uncovers the DNA methylation landscape of 22 673 gut phages

Y Ding, L Zhao, G Wang, Y Shi, G Guo… - Nucleic Acids …, 2023 - academic.oup.com
Gut phages have an important impact on human health. Methylation plays key roles in DNA
recognition, gene expression regulation and replication for phages. However, the DNA …

Epigenetic modulations for prevention of infectious diseases in shrimp aquaculture

GC Wikumpriya, MWS Prabhatha, J Lee, CH Kim - Genes, 2023 - mdpi.com
Aquaculture assumes a pivotal role in meeting the escalating global food demand, and
shrimp farming, in particular, holds a significant role in the global economy and food …

Deep DNAshape webserver: prediction and real-time visualization of DNA shape considering extended k-mers

J Li, R Rohs - Nucleic Acids Research, 2024 - academic.oup.com
Sequence-dependent DNA shape plays an important role in understanding protein–DNA
binding mechanisms. High-throughput prediction of DNA shape features has become a …

Altered expression of long noncoding RNA MEG3 in the offspring of gestational diabetes mellitus induces impaired glucose tolerance in adulthood

MM Yang, J Wei, LL Xu, YS Yan, Y Chen, M Lv… - Acta Diabetologica, 2024 - Springer
Aim Gestational diabetes mellitus (GDM) affects a significant number of women worldwide
and has been associated with lifelong health consequences for their offspring, including …

Gene-environmental regulation of the postnatal post-mitotic neuronal maturation

GS Prince, M Reynolds, V Martina, HS Sun - Trends in Genetics, 2024 - cell.com
Embryonic neurodevelopment, particularly neural progenitor differentiation into post-mitotic
neurons, has been extensively studied. While the number and composition of post-mitotic …