Antibiotic perturbations to the gut microbiome
Antibiotic-mediated perturbation of the gut microbiome is associated with numerous
infectious and autoimmune diseases of the gastrointestinal tract. Yet, as the gut microbiome …
infectious and autoimmune diseases of the gastrointestinal tract. Yet, as the gut microbiome …
The sporobiota of the human gut
The human gut microbiome is a diverse and complex ecosystem that plays a critical role in
health and disease. The composition of the gut microbiome has been well studied across all …
health and disease. The composition of the gut microbiome has been well studied across all …
Codiversification of gut microbiota with humans
The gut microbiomes of human populations worldwide have many core microbial species in
common. However, within a species, some strains can show remarkable population …
common. However, within a species, some strains can show remarkable population …
Multi-omics reveal microbial determinants impacting the treatment outcome of antidepressants in major depressive disorder
Background There is a growing body of evidence suggesting that disturbance of the gut-
brain axis may be one of the potential causes of major depressive disorder (MDD). However …
brain axis may be one of the potential causes of major depressive disorder (MDD). However …
[HTML][HTML] Mother–infant transmission of human microbiota
Humans are colonised by a highly adapted microbiota with coevolved functions that promote
human health, development and disease resistance. Acquisition and assembly of the …
human health, development and disease resistance. Acquisition and assembly of the …
Depletion of butyrate-producing microbes of the Firmicutes predicts nonresponse to FMT therapy in patients with recurrent Clostridium difficile infection
H Tian, J Cui, C Ye, J Zhao, B Yang, Y Xu, S Ji… - Gut …, 2023 - Taylor & Francis
Approximately 10% of individuals diagnosed with Clostridium difficile infection (CDI) show
the resistance to fecal microbiota transplantation (FMT), with the underlying mechanisms …
the resistance to fecal microbiota transplantation (FMT), with the underlying mechanisms …
Ecology and evolution of the social microbiome
Animals with close social relationships often have similar microbiomes. These socially
structured microbiomes can arise through multiple mechanisms that are often difficult to …
structured microbiomes can arise through multiple mechanisms that are often difficult to …
Evidence of cospeciation between termites and their gut bacteria on a geological time scale
Termites host diverse communities of gut microbes, including many bacterial lineages only
found in this habitat. The bacteria endemic to termite guts are transmitted via two routes: a …
found in this habitat. The bacteria endemic to termite guts are transmitted via two routes: a …
Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation
Background The understanding of how microbiomes assemble, function, and evolve
requires metagenomic tools that can resolve microbiota compositions at the strain level …
requires metagenomic tools that can resolve microbiota compositions at the strain level …
Transmission mode and dispersal traits correlate with host specificity in mammalian gut microbes
F Mazel, A Guisan, LW Parfrey - Molecular Ecology, 2024 - Wiley Online Library
Different host species associate with distinct gut microbes in mammals, a pattern sometimes
referred to as phylosymbiosis. However, the processes shaping this host specificity are not …
referred to as phylosymbiosis. However, the processes shaping this host specificity are not …