Controlling and enhancing CRISPR systems

H Shivram, BF Cress, GJ Knott, JA Doudna - Nature chemical biology, 2021 - nature.com
Many bacterial and archaeal organisms use clustered regularly interspaced short
palindromic repeats–CRISPR associated (CRISPR–Cas) systems to defend themselves …

Molecular mechanisms of CRISPR-Cas immunity in bacteria

PM Nussenzweig, LA Marraffini - Annual review of genetics, 2020 - annualreviews.org
Prokaryotes have developed numerous defense strategies to combat the constant threat
posed by the diverse genetic parasites that endanger them. Clustered regularly interspaced …

Evolutionary plasticity and functional versatility of CRISPR systems

EV Koonin, KS Makarova - PLoS Biology, 2022 - journals.plos.org
The principal biological function of bacterial and archaeal CRISPR systems is RNA-guided
adaptive immunity against viruses and other mobile genetic elements (MGEs). These …

Alternative functions of CRISPR–Cas systems in the evolutionary arms race

P Mohanraju, C Saha, P van Baarlen… - Nature Reviews …, 2022 - nature.com
CRISPR–Cas systems of bacteria and archaea comprise chromosomal loci with typical
repetitive clusters and associated genes encoding a range of Cas proteins. Adaptation of …

RNA-targeting CRISPR–Cas systems

SPB van Beljouw, J Sanders… - Nature Reviews …, 2023 - nature.com
CRISPR–Cas is a widespread adaptive immune system in bacteria and archaea that
protects against viral infection by targeting specific invading nucleic acid sequences …

[HTML][HTML] CBASS phage defense and evolution of antiviral nucleotide signaling

B Duncan-Lowey, PJ Kranzusch - Current opinion in immunology, 2022 - Elsevier
Cyclic oligonucleotide-based antiphage signaling system (CBASS) immunity is a
widespread form of antiphage defense in bacteria and archaea. Each CBASS operon …

Cyclic nucleotide signaling in phage defense and counter-defense

JS Athukoralage, MF White - Annual review of virology, 2022 - annualreviews.org
Advances in our understanding of prokaryotic antiphage defense mechanisms in the past
few years have revealed a multitude of new cyclic nucleotide signaling molecules that play a …

Accelerated RNA detection using tandem CRISPR nucleases

TY Liu, GJ Knott, DCJ Smock, JJ Desmarais… - Nature chemical …, 2021 - nature.com
Direct, amplification-free detection of RNA has the potential to transform molecular
diagnostics by enabling simple on-site analysis of human or environmental samples …

SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation

JA Steens, Y Zhu, DW Taylor, JPK Bravo… - Nature …, 2021 - nature.com
Characteristic properties of type III CRISPR-Cas systems include recognition of target RNA
and the subsequent induction of a multifaceted immune response. This involves sequence …

The Card1 nuclease provides defence during type III CRISPR immunity

JT Rostøl, W Xie, V Kuryavyi, P Maguin, K Kao… - Nature, 2021 - nature.com
In the type III CRISPR–Cas immune response of prokaryotes, infection triggers the
production of cyclic oligoadenylates that bind and activate proteins that contain a CARF …