Artificial intelligence in histopathology: enhancing cancer research and clinical oncology

A Shmatko, N Ghaffari Laleh, M Gerstung, JN Kather - Nature cancer, 2022 - nature.com
Artificial intelligence (AI) methods have multiplied our capabilities to extract quantitative
information from digital histopathology images. AI is expected to reduce workload for human …

[PDF][PDF] Artificial intelligence for multimodal data integration in oncology

J Lipkova, RJ Chen, B Chen, MY Lu, M Barbieri… - Cancer cell, 2022 - cell.com
In oncology, the patient state is characterized by a whole spectrum of modalities, ranging
from radiology, histology, and genomics to electronic health records. Current artificial …

Scaling vision transformers to gigapixel images via hierarchical self-supervised learning

RJ Chen, C Chen, Y Li, TY Chen… - Proceedings of the …, 2022 - openaccess.thecvf.com
Abstract Vision Transformers (ViTs) and their multi-scale and hierarchical variations have
been successful at capturing image representations but their use has been generally …

A survey on deep learning tools dealing with data scarcity: definitions, challenges, solutions, tips, and applications

L Alzubaidi, J Bai, A Al-Sabaawi, J Santamaría… - Journal of Big Data, 2023 - Springer
Data scarcity is a major challenge when training deep learning (DL) models. DL demands a
large amount of data to achieve exceptional performance. Unfortunately, many applications …

Towards a general-purpose foundation model for computational pathology

RJ Chen, T Ding, MY Lu, DFK Williamson, G Jaume… - Nature Medicine, 2024 - nature.com
Quantitative evaluation of tissue images is crucial for computational pathology (CPath) tasks,
requiring the objective characterization of histopathological entities from whole-slide images …

Algorithmic fairness in artificial intelligence for medicine and healthcare

RJ Chen, JJ Wang, DFK Williamson, TY Chen… - Nature biomedical …, 2023 - nature.com
In healthcare, the development and deployment of insufficiently fair systems of artificial
intelligence (AI) can undermine the delivery of equitable care. Assessments of AI models …

Dtfd-mil: Double-tier feature distillation multiple instance learning for histopathology whole slide image classification

H Zhang, Y Meng, Y Zhao, Y Qiao… - Proceedings of the …, 2022 - openaccess.thecvf.com
Multiple instance learning (MIL) has been increasingly used in the classification of
histopathology whole slide images (WSIs). However, MIL approaches for this specific …

Transformer-based unsupervised contrastive learning for histopathological image classification

X Wang, S Yang, J Zhang, M Wang, J Zhang… - Medical image …, 2022 - Elsevier
A large-scale and well-annotated dataset is a key factor for the success of deep learning in
medical image analysis. However, assembling such large annotations is very challenging …

Deep learning in histopathology: the path to the clinic

J Van der Laak, G Litjens, F Ciompi - Nature medicine, 2021 - nature.com
Abstract Machine learning techniques have great potential to improve medical diagnostics,
offering ways to improve accuracy, reproducibility and speed, and to ease workloads for …

Transmil: Transformer based correlated multiple instance learning for whole slide image classification

Z Shao, H Bian, Y Chen, Y Wang… - Advances in neural …, 2021 - proceedings.neurips.cc
Multiple instance learning (MIL) is a powerful tool to solve the weakly supervised
classification in whole slide image (WSI) based pathology diagnosis. However, the current …