[HTML][HTML] Genetic factors involved in rhizosphere colonization by phytobeneficial Pseudomonas spp.

A Zboralski, M Filion - Computational and Structural Biotechnology Journal, 2020 - Elsevier
Plant growth-promoting rhizobacteria (PGPR) actively colonize the soil portion under the
influence of plant roots, called the rhizosphere. Many plant-beneficial Pseudomonas spp …

From input to output: the Lap/c-di-GMP biofilm regulatory circuit

AJ Collins, TJ Smith, H Sondermann… - Annual review of …, 2020 - annualreviews.org
Biofilms are the dominant bacterial lifestyle. The regulation of the formation and dispersal of
bacterial biofilms has been the subject of study in many organisms. Over the last two …

Adaptive laboratory evolution of Pseudomonas putida KT2440 improves p-coumaric and ferulic acid catabolism and tolerance

ET Mohamed, AZ Werner, D Salvachúa… - Metabolic engineering …, 2020 - Elsevier
Pseudomonas putida KT2440 is a promising bacterial chassis for the conversion of lignin-
derived aromatic compound mixtures to biofuels and bioproducts. Despite the inherent …

Engineering glucose metabolism for enhanced muconic acid production in Pseudomonas putida KT2440

GJ Bentley, N Narayanan, RK Jha, D Salvachúa… - Metabolic …, 2020 - Elsevier
Pseudomonas putida KT2440 has received increasing attention as an important biocatalyst
for the conversion of diverse carbon sources to multiple products, including the olefinic …

Machine-learning from Pseudomonas putida KT2440 transcriptomes reveals its transcriptional regulatory network

HG Lim, K Rychel, AV Sastry, GJ Bentley, J Mueller… - Metabolic …, 2022 - Elsevier
Bacterial gene expression is orchestrated by numerous transcription factors (TFs).
Elucidating how gene expression is regulated is fundamental to understanding bacterial …

Pseudomonas fluorescens F113 type VI secretion systems mediate bacterial killing and adaption to the rhizosphere microbiome

D Durán, P Bernal, D Vazquez-Arias… - Scientific Reports, 2021 - nature.com
The genome of Pseudomonas fluorescens F113, a model rhizobacterium and a plant growth-
promoting agent, encodes three putative type VI secretion systems (T6SSs); F1-, F2-and F3 …

Plasmids manipulate bacterial behaviour through translational regulatory crosstalk

CMA Thompson, JPJ Hall, G Chandra, C Martins… - PLoS …, 2023 - journals.plos.org
Beyond their role in horizontal gene transfer, conjugative plasmids commonly encode
homologues of bacterial regulators. Known plasmid regulator homologues have highly …

[PDF][PDF] Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering

T Eng, D Banerjee, J Menasalvas, Y Chen, J Gin… - Cell Reports, 2023 - cell.com
Maximizing the production of heterologous biomolecules is a complex problem that can be
addressed with a systems-level understanding of cellular metabolism and regulation …

The carbon source-dependent pattern of antimicrobial activity and gene expression in Pseudomonas donghuensis P482

M Matuszewska, T Maciąg, M Rajewska… - Scientific Reports, 2021 - nature.com
Pseudomonas donghuensis P482 is a tomato rhizosphere isolate with the ability to inhibit
growth of bacterial and fungal plant pathogens. Herein, we analysed the impact of the …

Becoming settlers: Elements and mechanisms for surface colonization by Pseudomonas putida

M Espinosa‐Urgel… - Environmental …, 2023 - Wiley Online Library
Pseudomonads are considered to be among the most widespread culturable bacteria in
mesophilic environments. The evolutive success of Pseudomonas species can be attributed …