A transcriptome comparison of time-matched developing human, mouse and rat neural progenitor cells reveals human uniqueness

S Masjosthusmann, D Becker, B Petzuch… - Toxicology and applied …, 2018 - Elsevier
It is widely accepted that human brain development has unique features that cannot be
represented by rodents. Obvious reasons are the evolutionary distance and divergent …

Road map for development of stem cell-based alternative test methods

A Sachinidis, W Albrecht, P Nell, A Cherianidou… - Trends in molecular …, 2019 - cell.com
Much progress has been made in establishing strategies for differentiation of induced
human pluripotent stem cells (hiPSCs). However, differentiated hiPSCs are not yet routinely …

Evaluation of postmortem microarray data in bipolar disorder using traditional data comparison and artificial intelligence reveals novel gene targets

J Choi, DF Bodenstein, J Geraci… - Journal of Psychiatric …, 2021 - Elsevier
Large-scale microarray studies on post-mortem brain tissues have been utilized to
investigate the complex molecular pathology of bipolar disorder. However, a major …

In vitro models for neurotoxicology research

DJ Barbosa, JP Capela… - Toxicology …, 2015 - academic.oup.com
The nervous system has a highly complex organization, including many cell types with
multiple functions, with an intricate anatomy and unique structural and functional …

Development of a neural rosette formation assay (RoFA) to identify neurodevelopmental toxicants and to characterize their transcriptome disturbances

N Dreser, K Madjar, AK Holzer, M Kapitza… - Archives of …, 2020 - Springer
The first in vitro tests for developmental toxicity made use of rodent cells. Newer teratology
tests, eg developed during the ESNATS project, use human cells and measure mechanistic …

Assessment of stem cell differentiation based on genome-wide expression profiles

P Godoy, W Schmidt-Heck… - … of the Royal …, 2018 - royalsocietypublishing.org
In recent years, protocols have been established to differentiate stem and precursor cells
into more mature cell types. However, progress in this field has been hampered by …

Defining toxicological tipping points in neuronal network development

CL Frank, JP Brown, K Wallace, JF Wambaugh… - Toxicology and applied …, 2018 - Elsevier
Measuring electrical activity of neural networks by microelectrode array (MEA) has recently
shown promise for screening level assessments of chemical toxicity on network …

Determination of benchmark concentrations and their statistical uncertainty for cytotoxicity test data and functional in vitro assays

A Krebs, J Nyffeler, C Karreman, BZ Schmidt… - 2020 - kops.uni-konstanz.de
Many toxicological test methods, including assays of cell viability and function, require an
evaluation of concentration-response data. This often involves curve fitting, and the resulting …

Toxicogenomics directory of rat hepatotoxicants in vivo and in cultivated hepatocytes

M Grinberg, RM Stöber, W Albrecht, K Edlund… - Archives of …, 2018 - Springer
Transcriptomics is developing into an invaluable tool in toxicology. The aim of this study
was, using a transcriptomics approach, to identify genes that respond similar to many …

Kinetic modeling of stem cell transcriptome dynamics to identify regulatory modules of normal and disturbed neuroectodermal differentiation

J Meisig, N Dreser, M Kapitza, M Henry… - Nucleic acids …, 2020 - academic.oup.com
Thousands of transcriptome data sets are available, but approaches for their use in dynamic
cell response modelling are few, especially for processes affected simultaneously by two …