The paradox of enrichment, spatial heterogeneity, community effects and the phenomenon of apparent disappearance in the marine bacteriophage dynamics

A Korobeinikov, E Shchepakina, V Sobolev - The ANZIAM Journal, 2020 - cambridge.org
In aquatic microbial systems, high-magnitude variations in abundance, such as sudden
blooms alternating with comparatively long periods of very low abundance (“apparent …

Quantification of host and phage mRNA expression during infection using real-time PCR

MRJ Clokie - Bacteriophages: Methods and Protocols, Volume 2 …, 2009 - Springer
Real-time, or quantitative PCR, is a valuable technique useful in bacteriophage research to
quantify the abundance of phage or host gene transcripts. It can be used during the infection …

Development and evaluation of taxon-specific primers for the selected Caudovirales taxa

SK Newase, A Gupta, SG Dastager, BP Kapadnis… - Virus research, 2019 - Elsevier
The phage taxonomy is primarily based on the morphology derived from Transmission
Electron Microscopic (TEM) studies. TEM based characterization is authentic and accepted …

[PDF][PDF] VIRUSES IN THE NORTH SEA

A Garin-Fernandez - 2019 - core.ac.uk
Viruses are the most abundant biological entity on Earth (Suttle, 2005). In the ocean, their
concentration is estimated of~ 107 virus-like particles (VLP) per milliliter of surface seawater …

Bacterial Responses to Protist Predation: Cheating, facilitation, cooperation and phage transfer in mixed microbial communities

I Aijaz - 2017 - search.proquest.com
Shiga toxin (Stx) is encoded by temperate bacteriophages. Stx is only produced and
released by bacteria during phage lytic growth. Phage-encoded Stx released by E. coli kills …

[PDF][PDF] Molecular and genomic studies of temperate phages from Halomonas aquamarina and Bacillus spp. isolates from the Gulf of Mexico

JM Mobberley - 2007 - Citeseer
Viruses are the most abundant biological entities in the ocean and are believed to contribute
to nutrient cycling, bacterial diversity, and horizontal gene exchange. However, little is …

Viruses in the North Sea: viromics and prophage genomics

A Garin-Fernandez - 2019 - epic.awi.de
Despite their small size, viruses have an enormous influence on microbial population
dynamics, due to lysis and horizontal gene transfer. Due the high abundance of their hosts …

[PDF][PDF] Bacteriophage Ecology Group

ST Abedon - 2017 - Citeseer
In this day of search engines—and increasing expectation by students, the public, and
academics alike for finding answers to questions online—an effective, dynamic, and …

Bacteriophage-Encoded Molecules Regulate STEC Virulence

D Chakraborty - 2017 - search.proquest.com
Abstract Shiga toxin (Stx)-encoding Escherichia coli (STEC)[1] are a type of pathogenic E.
coli that cause human disease with symptoms such as severe stomach cramps, diarrhea …

[图书][B] Multiscale Analysis of Infectious Diseases: Integrating Omics and Clinical Informatics Data into Patient Care

TR Pak - 2017 - search.proquest.com
New sources of data, such as next generation sequencing (NGS) of pathogen genomes,
electronic medical records (EMR), and omics assays like RNA-seq and mass cytometry, are …