Assessing and advancing the safety of CRISPR-Cas tools: from DNA to RNA editing

J Tao, DE Bauer, R Chiarle - Nature Communications, 2023 - nature.com
CRISPR-Cas gene editing has revolutionized experimental molecular biology over the past
decade and holds great promise for the treatment of human genetic diseases. Here we …

Plant base editing and prime editing: the current status and future perspectives

J Li, C Zhang, Y He, S Li, L Yan, Y Li… - Journal of Integrative …, 2023 - Wiley Online Library
Precise replacement of an allele with an elite allele controlling an important agronomic trait
in a predefined manner by gene editing technologies is highly desirable in crop …

Adenine transversion editors enable precise, efficient A• T-to-C• G base editing in mammalian cells and embryos

L Chen, M Hong, C Luan, H Gao, G Ru, X Guo… - Nature …, 2024 - nature.com
Base editors have substantial promise in basic research and as therapeutic agents for the
correction of pathogenic mutations. The development of adenine transversion editors has …

Cytosine base editors induce off-target mutations and adverse phenotypic effects in transgenic mice

N Yan, H Feng, Y Sun, Y Xin, H Zhang, H Lu… - Nature …, 2023 - nature.com
Base editors have been reported to induce off-target mutations in cultured cells, mouse
embryos and rice, but their long-term effects in vivo remain unknown. Here, we develop a …

The design and application of DNA-editing enzymes as base editors

KL Rallapalli, AC Komor - Annual Review of Biochemistry, 2023 - annualreviews.org
DNA-editing enzymes perform chemical reactions on DNA nucleobases. These reactions
can change the genetic identity of the modified base or modulate gene expression. Interest …

Base editing of organellar DNA with programmable deaminases

JS Kim, J Chen - Nature Reviews Molecular Cell Biology, 2024 - nature.com
Mitochondria and chloroplasts are organelles that include their own genomes, which
encode key genes for ATP production and carbon dioxide fixation, respectively. Mutations in …

Base editor screens for in situ mutational scanning at scale

NZ Lue, BB Liau - Molecular Cell, 2023 - cell.com
A fundamental challenge in biology is understanding the molecular details of protein
function. How mutations alter protein activity, regulation, and response to drugs is of critical …

Programmable deaminase-free base editors for G-to-Y conversion by engineered glycosylase

H Tong, N Liu, Y Wei, Y Zhou, Y Li, D Wu… - National Science …, 2023 - academic.oup.com
Current DNA base editors contain nuclease and DNA deaminase that enables deamination
of cytosine (C) or adenine (A), but no method for guanine (G) or thymine (T) editing is …

Improving adenine and dual base editors through introduction of TadA-8e and Rad51DBD

N Xue, X Liu, D Zhang, Y Wu, Y Zhong, J Wang… - Nature …, 2023 - nature.com
Base editors, including dual base editors, are innovative techniques for efficient base
conversions in genomic DNA. However, the low efficiency of A-to-G base conversion at …

CoCas9 is a compact nuclease from the human microbiome for efficient and precise genome editing

E Pedrazzoli, M Demozzi, E Visentin, M Ciciani… - Nature …, 2024 - nature.com
The expansion of the CRISPR-Cas toolbox is highly needed to accelerate the development
of therapies for genetic diseases. Here, through the interrogation of a massively expanded …