Genome size diversity and its impact on the evolution of land plants
Genome size is a biodiversity trait that shows staggering diversity across eukaryotes, varying
over 64,000-fold. Of all major taxonomic groups, land plants stand out due to their …
over 64,000-fold. Of all major taxonomic groups, land plants stand out due to their …
[HTML][HTML] Genomics of evolutionary novelty in hybrids and polyploids
G Nieto Feliner, J Casacuberta, JF Wendel - Frontiers in genetics, 2020 - frontiersin.org
It has long been recognized that hybridization and polyploidy are prominent processes in
plant evolution. Although classically recognized as significant in speciation and adaptation …
plant evolution. Although classically recognized as significant in speciation and adaptation …
[HTML][HTML] Allele-aware chromosome-level genome assembly and efficient transgene-free genome editing for the autotetraploid cultivated alfalfa
Artificially improving traits of cultivated alfalfa (Medicago sativa L.), one of the most important
forage crops, is challenging due to the lack of a reference genome and an efficient genome …
forage crops, is challenging due to the lack of a reference genome and an efficient genome …
[HTML][HTML] Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants
The sharp increase of plant genome and transcriptome data provide valuable resources to
investigate evolutionary consequences of gene duplication in a range of taxa, and unravel …
investigate evolutionary consequences of gene duplication in a range of taxa, and unravel …
[HTML][HTML] Genetic contribution of paleopolyploidy to adaptive evolution in angiosperms
Ancient whole-genome duplications (WGDs or polyploidy) are prevalent in plants, and some
WGDs occurred during the timing of severe global environmental changes. It has been …
WGDs occurred during the timing of severe global environmental changes. It has been …
The pangenome of hexaploid bread wheat
There is an increasing understanding that variation in gene presence–absence plays an
important role in the heritability of agronomic traits; however, there have been relatively few …
important role in the heritability of agronomic traits; however, there have been relatively few …
[HTML][HTML] Reshuffling of the ancestral core-eudicot genome shaped chromatin topology and epigenetic modification in Panax
ZH Wang, XF Wang, T Lu, MR Li, P Jiang… - Nature …, 2022 - nature.com
All extant core-eudicot plants share a common ancestral genome that has experienced
cyclic polyploidizations and (re) diploidizations. Reshuffling of the ancestral core-eudicot …
cyclic polyploidizations and (re) diploidizations. Reshuffling of the ancestral core-eudicot …
[HTML][HTML] A collinearity-incorporating homology inference strategy for connecting emerging assemblies in the triticeae tribe as a pilot practice in the plant pangenomic …
Y Chen, W Song, X Xie, Z Wang, P Guan, H Peng… - Molecular Plant, 2020 - Elsevier
Plant genome sequencing has dramatically increased, and some species even have
multiple high-quality reference versions. Demands for clade-specific homology inference …
multiple high-quality reference versions. Demands for clade-specific homology inference …
Impact of transposable elements on polyploid plant genomes
CM Vicient, JM Casacuberta - Annals of Botany, 2017 - academic.oup.com
Background The growing wealth of knowledge on whole-plant genome sequences is
highlighting the key role of transposable elements (TEs) in plant evolution, as a driver of …
highlighting the key role of transposable elements (TEs) in plant evolution, as a driver of …
The long and short of doubling down: polyploidy, epigenetics, and the temporal dynamics of genome fractionation
We consider the rapidly advancing discipline of plant evolutionary genomics, with a focus on
the evolution of polyploid genomes. In many lineages, polyploidy is followed by 'biased …
the evolution of polyploid genomes. In many lineages, polyploidy is followed by 'biased …