H-NS: a universal regulator for a dynamic genome

CJ Dorman - Nature Reviews Microbiology, 2004 - nature.com
The effect of the bacterial heat-stable nucleoid-structuring (H-NS) protein on gene
expression is overwhelmingly negative and extends throughout the genome, pointing to an …

The role of nucleoid‐associated proteins in the organization and compaction of bacterial chromatin

RT Dame - Molecular microbiology, 2005 - Wiley Online Library
The bacterial chromosomal DNA is folded into a compact structure called nucleoid. The
shape and size of this 'body'is determined by a number of factors. Major players are DNA …

[HTML][HTML] DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP

BJ Paul, MM Barker, W Ross, DA Schneider, C Webb… - Cell, 2004 - cell.com
Ribosomal RNA (rRNA) transcription is regulated primarily at the level of initiation from rRNA
promoters. The unusual kinetic properties of these promoters result in their specific …

Identification and characterization of E. coli CRISPR‐cas promoters and their silencing by H‐NS

Ü Pul, R Wurm, Z Arslan, R Geißen… - Molecular …, 2010 - Wiley Online Library
Inheritable bacterial defence systems against phage infection and foreign DNA, termed
CRISPR (clustered regularly interspaced short palindromic repeats), consist of cas protein …

H‐NS‐mediated repression of CRISPR‐based immunity in Escherichia coli K12 can be relieved by the transcription activator LeuO

ER Westra, Ü Pul, N Heidrich, MM Jore… - Molecular …, 2010 - Wiley Online Library
The recently discovered prokaryotic CRISPR/Cas defence system provides immunity against
viral infections and plasmid conjugation. It has been demonstrated that in Escherichia coli …

rRNA Transcription in Escherichia coli

BJ Paul, W Ross, T Gaal, RL Gourse - Annu. Rev. Genet., 2004 - annualreviews.org
▪ Abstract Ribosomal RNA transcription is the rate-limiting step in ribosome synthesis in
bacteria and has been investigated intensely for over half a century. Multiple mechanisms …

Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria

DM Stoebel, A Free, CJ Dorman - Microbiology, 2008 - microbiologyresearch.org
The H-NS nucleoid-associated DNA-binding protein is an important global repressor of
transcription in Gram-negative bacteria. Recently, H-NS has been implicated in the process …

Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle

P Sobetzko, A Travers… - Proceedings of the …, 2012 - National Acad Sciences
In Escherichia coli crosstalk between DNA supercoiling, nucleoid-associated proteins and
major RNA polymerase σ initiation factors regulates growth phase-dependent gene …

Nucleoid-associated proteins shape chromatin structure and transcriptional regulation across the bacterial kingdom

HM Amemiya, J Schroeder, PL Freddolino - Transcription, 2021 - Taylor & Francis
Genome architecture has proven to be critical in determining gene regulation across almost
all domains of life. While many of the key components and mechanisms of eukaryotic …

Control of rRNA expression by small molecules is dynamic and nonredundant

HD Murray, DA Schneider, RL Gourse - Molecular cell, 2003 - cell.com
The control of ribosomal RNA transcription is one of the most enduring issues in molecular
microbiology, having been subjected to intense scrutiny for over 50 years. Rapid changes in …