[HTML][HTML] Phase separation and neurodegenerative diseases: a disturbance in the force

A Zbinden, M Pérez-Berlanga, P De Rossi… - Developmental cell, 2020 - cell.com
Protein aggregation is the main hallmark of neurodegenerative diseases. Many proteins
found in pathological inclusions are known to undergo liquid-liquid phase separation, a …

Bottom-up proteomics: advancements in sample preparation

VA Duong, H Lee - International journal of molecular sciences, 2023 - mdpi.com
Liquid chromatography–tandem mass spectrometry (LC–MS/MS)-based proteomics is a
powerful technique for profiling proteomes of cells, tissues, and body fluids. Typical bottom …

TMTpro-18plex: the expanded and complete set of TMTpro reagents for sample multiplexing

J Li, Z Cai, RD Bomgarden, I Pike, K Kuhn… - Journal of proteome …, 2021 - ACS Publications
The development of the TMTpro-16plex series expanded the breadth of commercial isobaric
tagging reagents by nearly 50% over classic TMT-11plex. In addition to the described …

Ubiquitin modifications

KN Swatek, D Komander - Cell research, 2016 - nature.com
Protein ubiquitination is a dynamic multifaceted post-translational modification involved in
nearly all aspects of eukaryotic biology. Once attached to a substrate, the 76-amino acid …

[HTML][HTML] Ultradeep human phosphoproteome reveals a distinct regulatory nature of Tyr and Ser/Thr-based signaling

K Sharma, RCJ D'Souza, S Tyanova, C Schaab… - Cell reports, 2014 - cell.com
Regulatory protein phosphorylation controls normal and pathophysiological signaling in
eukaryotic cells. Despite great advances in mass-spectrometry-based proteomics, the …

Regulation of PRKN-independent mitophagy

P Terešak, A Lapao, N Subic, P Boya, Z Elazar… - Autophagy, 2022 - Taylor & Francis
Mitochondria are dynamic, multifunctional cellular organelles that play a fundamental role in
maintaining cellular homeostasis. Keeping the quality of mitochondria in check is of …

USP14: structure, function, and target inhibition

F Wang, S Ning, B Yu, Y Wang - Frontiers in Pharmacology, 2022 - frontiersin.org
Ubiquitin-specific protease 14 (USP14), a deubiquitinating enzyme (DUB), is associated
with proteasomes and exerts a dual function in regulating protein degradation. USP14 …

Cystathionine-β-synthase: molecular regulation and pharmacological inhibition

K Zuhra, F Augsburger, T Majtan, C Szabo - Biomolecules, 2020 - mdpi.com
Cystathionine-β-synthase (CBS), the first (and rate-limiting) enzyme in the transsulfuration
pathway, is an important mammalian enzyme in health and disease. Its biochemical …

PICALM and Alzheimer's disease: an update and perspectives

K Ando, S Nagaraj, F Küçükali, MA De Fisenne… - Cells, 2022 - mdpi.com
Genome-wide association studies (GWAS) have identified the PICALM (Phosphatidylinositol
binding clathrin-assembly protein) gene as the most significant genetic susceptibility locus …

Post-translational modifications of Hsp90 and translating the chaperone code

SJ Backe, RA Sager, MR Woodford… - Journal of Biological …, 2020 - ASBMB
Cells have a remarkable ability to synthesize large amounts of protein in a very short period
of time. Under these conditions, many hydrophobic surfaces on proteins may be transiently …