Association mapping: critical considerations shift from genotyping to experimental design
The goal of many plant scientists' research is to explain natural phenotypic variation in terms
of simple changes in DNA sequence. Traditionally, linkage mapping has been the most …
of simple changes in DNA sequence. Traditionally, linkage mapping has been the most …
Association genetics in crop improvement
JA Rafalski - Current opinion in plant biology, 2010 - Elsevier
Increased availability of high throughput genotyping technology together with advances in
DNA sequencing and in the development of statistical methodology appropriate for genome …
DNA sequencing and in the development of statistical methodology appropriate for genome …
Genebank genomics highlights the diversity of a global barley collection
SG Milner, M Jost, S Taketa, ER Mazón… - Nature …, 2019 - nature.com
Genebanks hold comprehensive collections of cultivars, landraces and crop wild relatives of
all major food crops, but their detailed characterization has so far been limited to sparse core …
all major food crops, but their detailed characterization has so far been limited to sparse core …
Comparing different statistical models and multiple testing corrections for association mapping in soybean and maize
AS Kaler, JD Gillman, T Beissinger… - Frontiers in plant …, 2020 - frontiersin.org
Association mapping (AM) is a powerful tool for fine mapping complex trait variation down to
nucleotide sequences by exploiting historical recombination events. A major problem in AM …
nucleotide sequences by exploiting historical recombination events. A major problem in AM …
A genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in a worldwide collection of hexaploid spring wheat (Triticum aestivum L.)
New races of Puccinia striiformis f. sp. tritici (Pst), the causal pathogen of wheat stripe rust,
show high virulence to previously deployed resistance genes and are responsible for large …
show high virulence to previously deployed resistance genes and are responsible for large …
Genome wide association studies using a new nonparametric model reveal the genetic architecture of 17 agronomic traits in an enlarged maize association panel
Association mapping is a powerful approach for dissecting the genetic architecture of
complex quantitative traits using high-density SNP markers in maize. Here, we expanded …
complex quantitative traits using high-density SNP markers in maize. Here, we expanded …
Marker-assisted plant breeding: principles and practices
BD Singh, AK Singh - 2015 - Springer
Improved genotypes developed by plant breeding remain pivotal to global food security. In
the wake of ever-increasing human population, declining agricultural resources and the …
the wake of ever-increasing human population, declining agricultural resources and the …
Genome-wide association study for flowering time, maturity dates and plant height in early maturing soybean (Glycine max) germplasm
Abstract Background Soybean (Glycine max) is a photoperiod-sensitive and self-pollinated
species. Days to flowering (DTF) and maturity (DTM), duration of flowering-to-maturity …
species. Days to flowering (DTF) and maturity (DTM), duration of flowering-to-maturity …
Genome-wide association studies for agronomical traits in a world wide spring barley collection
Background Genome-wide association studies (GWAS) based on linkage disequilibrium
(LD) provide a promising tool for the detection and fine mapping of quantitative trait loci …
(LD) provide a promising tool for the detection and fine mapping of quantitative trait loci …
Software for genome‐wide association studies in autopolyploids and its application to potato
Genome‐wide association studies (GWAS) are widely used in diploid species to study
complex traits in diversity and breeding populations, but GWAS software tailored to …
complex traits in diversity and breeding populations, but GWAS software tailored to …