[HTML][HTML] Arresting evolution

JJ Bull, JE Barrick - Trends in Genetics, 2017 - cell.com
Evolution in the form of selective breeding has long been harnessed as a useful tool by
humans. However, rapid evolution can also be a danger to our health and a stumbling block …

Natural transformation as a tool in Acinetobacter baylyi: streamlined engineering and mutational analysis

SR Bedore, EL Neidle, I Pardo, J Luo, AC Baugh… - Methods in …, 2023 - Elsevier
Natural transformation and homologous recombination in a soil bacterium, Acinetobacter
baylyi ADP1, occur with exceptionally high efficiency. These genetic features can be …

Improved Stability of Engineered Ammonia Production in the Plant-Symbiont Azospirillum brasilense

T Schnabel, E Sattely - ACS synthetic biology, 2021 - ACS Publications
Bioavailable nitrogen is the limiting nutrient for most agricultural food production. Associative
diazotrophs can colonize crop roots and fix their own bioavailable nitrogen from the …

Rapid and assured genetic engineering methods applied to Acinetobacter baylyi ADP1 genome streamlining

GA Suárez, KR Dugan, BA Renda… - Nucleic Acids …, 2020 - academic.oup.com
One goal of synthetic biology is to improve the efficiency and predictability of living cells by
removing extraneous genes from their genomes. We demonstrate improved methods for …

CRISPR-interference-based modulation of mobile genetic elements in bacteria

Á Nyerges, B Bálint, J Cseklye, I Nagy, C Pál… - Synthetic …, 2019 - academic.oup.com
Spontaneous mutagenesis of synthetic genetic constructs by mobile genetic elements
frequently results in the rapid loss of engineered functions. Previous efforts to minimize such …

[HTML][HTML] Effect of Nutritional Determinants and TonB on the Natural Transformation of Riemerella anatipestifer

L Zhang, L Huang, M Huang, M Wang, D Zhu… - Frontiers in …, 2021 - frontiersin.org
Riemerella anatipestifer is a gram-negative bacterium that is the first naturally competent
bacterium identified in the family Flavobacteriaceae. However, the determinants that …

[HTML][HTML] Wax ester production in nitrogen-rich conditions by metabolically engineered Acinetobacter baylyi ADP1

J Luo, E Efimova, P Losoi, V Santala… - Metabolic Engineering …, 2020 - Elsevier
Metabolic engineering can be used as a powerful tool to redirect cell resources towards
product synthesis, also in conditions that are not optimal for the production. An example of …

Natural transformation as a tool in Acinetobacter baylyi: Evolution by amplification of gene copy number

I Pardo, SR Bedore, MP Tumen-Velasquez… - Methods in …, 2023 - Elsevier
For many years, the natural competency of Acinetobacter baylyi ADP1 facilitated studies of
bacterial metabolism, biochemistry, and physiology. With the advent of synthetic biology …

Methods for measuring the evolutionary stability of engineered genomes to improve their longevity

SL Nuismer, N C. Layman, AJ Redwood… - Synthetic …, 2021 - academic.oup.com
Diverse applications rely on engineering microbes to carry and express foreign transgenes.
This engineered baggage rarely benefits the microbe and is thus prone to rapid evolutionary …

Exploring selective pressure trade-offs for synthetic addiction to extend metabolite productive lifetimes in yeast

SW Lee, P Rugbjerg, MOA Sommer - ACS Synthetic Biology, 2021 - ACS Publications
Engineered microbes often suffer from reduced fitness resulting from metabolic burden and
various stresses. The productive lifetime of a bioreactor with engineered microbes is …