Long noncoding RNA and cancer: a new paradigm

A Bhan, M Soleimani, SS Mandal - Cancer research, 2017 - AACR
In addition to mutations or aberrant expression in the protein-coding genes, mutations and
misregulation of noncoding RNAs, in particular long noncoding RNAs (lncRNA), appear to …

Long noncoding RNAs: emerging stars in gene regulation, epigenetics and human disease

A Bhan, SS Mandal - ChemMedChem, 2014 - Wiley Online Library
Noncoding RNAs (ncRNAs) are classes of transcripts that are encoded by the genome and
transcribed but never get translated into proteins. Though not translated into proteins …

[HTML][HTML] Long non-coding RNAs: versatile master regulators of gene expression and crucial players in cancer

L Nie, HJ Wu, JM Hsu, SS Chang… - American journal of …, 2012 - ncbi.nlm.nih.gov
With rapid development of sequencing technologies such as deep sequencing and whole
genome high-density tiling array, we now know that most of the “junk” genomic sequences …

Kcnq1ot1: a chromatin regulatory RNA

C Kanduri - Seminars in cell & developmental biology, 2011 - Elsevier
There is a growing interest for noncoding RNA (ncRNA)-mediated epigenetic regulation of
transcription in diverse biological functions. Recent evidence suggests that a subset of long …

A novel H19 antisense RNA overexpressed in breast cancer contributes to paternal IGF2 expression

N Berteaux, N Aptel, G Cathala, C Genton… - … and cellular biology, 2008 - Am Soc Microbiol
The H19/IGFf2 locus belongs to a large imprinted domain located on human chromosome
11p15. 5 (homologue to mouse distal chromosome 7). The H19 gene is expressed from the …

Regulation of the mammalian epigenome by long noncoding RNAs

J Whitehead, GK Pandey, C Kanduri - Biochimica et Biophysica Acta (BBA) …, 2009 - Elsevier
Genomic analyses have demonstrated that although less than 2% of the mammalian
genome encodes proteins, at least two thirds is transcribed. Many nontranslated RNAs have …

Kcnq1ot1/Lit1 Noncoding RNA Mediates Transcriptional Silencing by Targeting to the Perinucleolar Region

F Mohammad, RR Pandey, T Nagano… - … and cellular biology, 2008 - Taylor & Francis
The Kcnq1ot1 antisense noncoding RNA has been implicated in long-range bidirectional
silencing, but the underlying mechanisms remain enigmatic. Here we characterize a domain …

[HTML][HTML] Regulation of functional KCNQ1OT1 lncRNA by β-catenin

N Sunamura, T Ohira, M Kataoka, D Inaoka… - Scientific reports, 2016 - nature.com
Long noncoding RNAs (lncRNAs) have been implicated in many biological processes
through epigenetic mechanisms. We previously reported that KCNQ1OT1, an imprinted …

[HTML][HTML] Evolution of genome-organizing long non-coding RNAs in metazoans

A Ramírez-Colmenero, K Oktaba… - Frontiers in …, 2020 - frontiersin.org
Long non-coding RNAs (lncRNAs) have important regulatory functions across eukarya. It is
now clear that many of these functions are related to gene expression regulation through …

Grabbing the genome by the NADs

TD Matheson, PD Kaufman - Chromosoma, 2016 - Springer
The regions of the genome that interact frequently with the nucleolus have been termed
nucleolar-associated domains (NADs). Deep sequencing and DNA-fluorescence in situ …