Targeted capture in evolutionary and ecological genomics

MR Jones, JM Good - Molecular ecology, 2016 - Wiley Online Library
The rapid expansion of next‐generation sequencing has yielded a powerful array of tools to
address fundamental biological questions at a scale that was inconceivable just a few years …

Molecular genetic variation of animals and plants under domestication

L Andersson, M Purugganan - Proceedings of the National …, 2022 - National Acad Sciences
Domesticated plants and animals played crucial roles as models for evolutionary change by
means of natural selection and for establishing the rules of inheritance, originally proposed …

[HTML][HTML] An intercross population study reveals genes associated with body size and plumage color in ducks

Z Zhou, M Li, H Cheng, W Fan, Z Yuan, Q Gao… - Nature …, 2018 - nature.com
Comparative population genomics offers an opportunity to discover the signatures of
artificial selection during animal domestication, however, their function cannot be directly …

[HTML][HTML] Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

FAANG Consortium, L Andersson, AL Archibald… - Genome biology, 2015 - Springer
Coordinated international action to accelerate genome-to-phenome with FAANG, the
Functional Annotation of Animal Genomes project | Genome Biology Skip to main content …

Advances and limits of using population genetics to understand local adaptation

P Tiffin, J Ross-Ibarra - Trends in ecology & evolution, 2014 - cell.com
Local adaptation shapes species diversity, can be a stepping stone to ecological speciation,
and can facilitate species range expansion. Population genetic analyses, which complement …

Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes

LAF Frantz, JG Schraiber, O Madsen, HJ Megens… - Nature …, 2015 - nature.com
Traditionally, the process of domestication is assumed to be initiated by humans, involve few
individuals and rely on reproductive isolation between wild and domestic forms. We …

[HTML][HTML] A single generation of domestication heritably alters the expression of hundreds of genes

MR Christie, ML Marine, SE Fox, RA French… - Nature …, 2016 - nature.com
The genetic underpinnings associated with the earliest stages of plant and animal
domestication have remained elusive. Because a genome-wide response to selection can …

The taming of the neural crest: a developmental perspective on the origins of morphological covariation in domesticated mammals

MR Sánchez-Villagra, M Geiger… - Royal Society open …, 2016 - royalsocietypublishing.org
Studies on domestication are blooming, but the developmental bases for the generation of
domestication traits and breed diversity remain largely unexplored. Some phenotypic …

[HTML][HTML] Self-domestication in Homo sapiens: Insights from comparative genomics

C Theofanopoulou, S Gastaldon, T O'Rourke… - PloS one, 2017 - journals.plos.org
This study identifies and analyzes statistically significant overlaps between selective sweep
screens in anatomically modern humans and several domesticated species. The results …

[HTML][HTML] Yak whole-genome resequencing reveals domestication signatures and prehistoric population expansions

Q Qiu, L Wang, K Wang, Y Yang, T Ma, Z Wang… - Nature …, 2015 - nature.com
Yak domestication represents an important episode in the early human occupation of the
high-altitude Qinghai-Tibet Plateau (QTP). The precise timing of domestication is debated …