[HTML][HTML] Advanced high-throughput plant phenotyping techniques for genome-wide association studies: A review
Q Xiao, X Bai, C Zhang, Y He - Journal of advanced research, 2022 - Elsevier
Background Linking phenotypes and genotypes to identify genetic architectures that
regulate important traits is crucial for plant breeding and the development of plant genomics …
regulate important traits is crucial for plant breeding and the development of plant genomics …
Interdisciplinary strategies to enable data-driven plant breeding in a changing climate
This perspective lays out a framework to enable the breeding of crops that can meet
worldwide demand under the challenges of global climate change. Past work in various …
worldwide demand under the challenges of global climate change. Past work in various …
[PDF][PDF] Evaluating the power and limitations of genome-wide association studies in Caenorhabditis elegans
Quantitative genetics in Caenorhabditis elegans seeks to identify naturally segregating
genetic variants that underlie complex traits. Genome-wide association studies scan the …
genetic variants that underlie complex traits. Genome-wide association studies scan the …
Genome-wide association studies reveal novel loci for resistance to groundnut rosette disease in the African core groundnut collection
E Achola, P Wasswa, D Fonceka, JP Clevenger… - Theoretical and Applied …, 2023 - Springer
Key message We identified markers associated with GRD resistance after screening an
Africa-wide core collection across three seasons in Uganda Abstract Groundnut is cultivated …
Africa-wide core collection across three seasons in Uganda Abstract Groundnut is cultivated …
Exploring genetic architecture for pod-related traits in soybean using image-based phenotyping
F Chang, W Lv, P Lv, Y Xiao, W Yan, S Chen… - Molecular …, 2021 - Springer
Mature pod color (PC) and pod size (PS) served as important characteristics are used in the
soybean breeding programs. However, manual phenotyping of such complex traits is time …
soybean breeding programs. However, manual phenotyping of such complex traits is time …
Exploring efficient linear mixed models to detect quantitative trait locus-by-environment interactions
E Yamamoto, H Matsunaga - G3, 2021 - academic.oup.com
Genotype-by-environment (G× E) interactions are important for understanding genotype–
phenotype relationships. To date, various statistical models have been proposed to account …
phenotype relationships. To date, various statistical models have been proposed to account …
Identification and utilization of genetic determinants of trait measurement errors in image-based, high-throughput phenotyping
The accuracy of trait measurements greatly affects the quality of genetic analyses. During
automated phenotyping, trait measurement errors, ie differences between automatically …
automated phenotyping, trait measurement errors, ie differences between automatically …
Neighbor GWAS: incorporating neighbor genotypic identity into genome-wide association studies of field herbivory
An increasing number of field studies have shown that the phenotype of an individual plant
depends not only on its genotype but also on those of neighboring plants; however, this fact …
depends not only on its genotype but also on those of neighboring plants; however, this fact …
Assessment of two statistical approaches for variance genome-wide association studies in plants
Genomic loci that control the variance of agronomically important traits are increasingly
important due to the profusion of unpredictable environments arising from climate change …
important due to the profusion of unpredictable environments arising from climate change …
Identifying novel associations in GWAS by hierarchical Bayesian latent variable detection of differentially misclassified phenotypes
A Shafquat, RG Crystal, JG Mezey - BMC bioinformatics, 2020 - Springer
Background Heterogeneity in the definition and measurement of complex diseases in
Genome-Wide Association Studies (GWAS) may lead to misdiagnoses and misclassification …
Genome-Wide Association Studies (GWAS) may lead to misdiagnoses and misclassification …