Characterization of folic acid‐functionalized PLA–PEG nanomicelle to deliver Letrozole: A nanoinformatics study

N Rostami, R Davarnejad - IET nanobiotechnology, 2022 - Wiley Online Library
Effective cancer treatment is currently the number one challenge to human health. To date,
several treatment methods have been introduced for cancer cell targeting. Among the …

Integrated covalent drug design workflow using site identification by ligand competitive saturation

W Yu, DJ Weber, AD MacKerell Jr - Journal of chemical theory …, 2023 - ACS Publications
Covalent drug design is an important component in drug discovery. Traditional drugs
interact with their target in a reversible equilibrium, while irreversible covalent drugs …

Microscopic view of lipids and their diverse biological functions

PC Wen, P Mahinthichaichan, N Trebesch… - Current opinion in …, 2018 - Elsevier
Biological membranes and their diverse lipid constituents play key roles in a broad spectrum
of cellular and physiological processes. Characterization of membrane-associated …

Membrane anchoring of the DIRAS3 N-terminal extension permits tumor suppressor function

X Liang, SY Jung, LW Fong, G Bildik, JP Gray, W Mao… - Iscience, 2023 - cell.com
DIRAS3 is an imprinted tumor suppressor gene encoding a GTPase that has a distinctive N-
terminal extension (NTE) not found in other RAS proteins. This NTE and the prenylated C …

A Kepler workflow tool for reproducible AMBER GPU molecular dynamics

S Purawat, PU Ieong, RD Malmstrom, GJ Chan… - Biophysical …, 2017 - cell.com
With the drive toward high throughput molecular dynamics (MD) simulations involving ever-
greater numbers of simulation replicates run for longer, biologically relevant timescales …

On the ubiquity of helical α-synuclein tetramers

L Xu, S Bhattacharya, D Thompson - Physical Chemistry Chemical …, 2019 - pubs.rsc.org
The experimental finding that α-synuclein (αS) occurs physiologically as a helically folded
tetramer begs the question: why are helical tetramers the most populated multimers? While …

Investigation of the differences in antithrombin to heparin binding among antithrombin Budapest 3, Basel, and Padua mutations by biochemical and in silico methods

R Gindele, K Pénzes-Daku, G Balogh, J Kállai… - Biomolecules, 2021 - mdpi.com
Antithrombin (AT) is a serine protease inhibitor, its activity is highly accelerated by heparin.
Mutations at the heparin-binding region lead to functional defect, type II heparin-binding site …

[HTML][HTML] High-resolution in situ structures of mammalian respiratory supercomplexes

W Zheng, P Chai, J Zhu, K Zhang - Nature, 2024 - nature.com
Mitochondria play a pivotal part in ATP energy production through oxidative
phosphorylation, which occurs within the inner membrane through a series of respiratory …

Studying the Collective Functional Response of a Receptor in Alchemical Ligand Binding Free Energy Simulations with Accelerated Solvation Layer Dynamics

W Jiang - Journal of Chemical Theory and Computation, 2024 - ACS Publications
Ligand binding free energy simulations (LB-FES) that involve sampling of protein functional
conformations have been longstanding challenges in research on molecular recognition …

Identification of novel antimicrobial compounds targeting Mycobacterium tuberculosis shikimate kinase using in silico hierarchical structure-based drug screening

S Kawamoto, C Hori, H Taniguchi, S Okubo, S Aoki - Tuberculosis, 2023 - Elsevier
The development of new anti-TB drugs to prevent the spread of multidrug-resistant
Mycobacterium tuberculosis (Mtb) strains is imperative. Mtb shikimate kinase (MtSK) was …