REVEILLE2 thermosensitive splicing: a molecular basis for the integration of nocturnal temperature information by the Arabidopsis circadian clock

AB James, C Sharples, J Laird, EM Armstrong… - New …, 2024 - Wiley Online Library
Cold stress is one of the major environmental factors that limit growth and yield of plants.
However, it is still not fully understood how plants account for daily temperature fluctuations …

Nuclear OsFKBP20‐1b maintains SR34 stability and promotes the splicing of retained introns upon ABA exposure in rice

H Jung, HJ Park, SH Jo, A Lee, HJ Lee… - New …, 2023 - Wiley Online Library
Alternative splicing (AS) is a critical means by which plants respond to changes in the
environment, but few splicing factors contributing to AS have been reported and functionally …

Expression elements derived from plant sequences provide effective gene expression regulation and new opportunities for plant biotechnology traits

JPC To, IW Davis, MS Marengo, A Shariff… - Frontiers in Plant …, 2021 - frontiersin.org
Plant biotechnology traits provide a means to increase crop yields, manage weeds and
pests, and sustainably contribute to addressing the needs of a growing population. One of …

Computational Analysis of Alternative Splicing Using VAST-TOOLS and the VastDB Framework

A Gohr, F Mantica, A Hermoso-Pulido, J Tapial… - … Splicing: Methods and …, 2022 - Springer
Alternative splicing (AS) can vastly expand animal transcriptomes and proteomes. Two main
open questions in the field are how AS is regulated across cell/tissue types and disease …

[HTML][HTML] Cell signaling during drought and/or cold stress in cassava

S Li, P Zhao, X Yu, W Liao, M Peng, M Ruan - Tropical Plants, 2022 - maxapress.com
Abstract Cassava (Manihot esculenta Crantz) is a root crop significant in food security and
various bio-industrial applications such as animal feed, modified starch, and biofuels …

The core stomatal proteins SPCH, MUTE and FAMA associate with both types of ICE proteins, VrICE1 and VrICE4, in Vitis riparia

MA Rahman, A Edge, L Alibabai, A Nassuth - … and Experimental Plant …, 2024 - Springer
Abstract SPEECHLESS (SPCH), MUTE and FAMA drive stomatal development in
Arabidopsis. They do so in association with SCREAM/INDUCER OF CBF EXPRESSION …

Full-length transcriptome sequencing reveals the impact of cold stress on alternative splicing in quinoa

L Zheng, Y Zhao, Y Gan, H Li, S Luo, X Liu, Y Li… - International Journal of …, 2022 - mdpi.com
Quinoa is a cold-resistant and nutrient-rich crop. To decipher the cold stress response of
quinoa, the full-length transcriptomes of the cold-resistant quinoa variety CRQ64 and the …

Identification of Zinc Finger (ZnF) Genes that Undergo Tissue-specific Alternative Splicing in Arabidopsis thaliana

U Qulsum, MTA Azad… - Egyptian Journal of …, 2024 - ejbo.journals.ekb.eg
RNA editing involves the post-transcriptional modification of genes, whereas alternative
splicing involves both post-and co-transcriptional regulation of gene expression. Our …

The plant-specific SCL30a SR protein regulates ABA-dependent seed traits and salt stress tolerance during germination

T Laloum, SD Carvalho, G Martín, DN Richardson… - bioRxiv, 2021 - biorxiv.org
Abstract SR (serine/arginine-rich) proteins are conserved RNA-binding proteins best known
as key regulators of splicing, which have also been implicated in other steps of gene …

Downregulation of Barley Regulator of Telomere Elongation Helicase 1 Alters the Distribution of Meiotic Crossovers

A Barakate, M Arrieta, M Macaulay, S Vivera… - Frontiers in Plant …, 2021 - frontiersin.org
Programmed meiotic DNA double-strand breaks (DSBs), necessary for proper chromosomal
segregation and viable gamete formation, are repaired by homologous recombination (HR) …