Genomic medicine for kidney disease

EE Groopman, HM Rasouly, AG Gharavi - Nature Reviews Nephrology, 2018 - nature.com
Technologies such as next-generation sequencing and chromosomal microarray have
advanced the understanding of the molecular pathogenesis of a variety of renal disorders …

[HTML][HTML] Next generation sequencing and the future of genetic diagnosis

K Lohmann, C Klein - Neurotherapeutics, 2014 - Elsevier
The introduction of next generation sequencing (NGS) has led to an exponential increase of
elucidated genetic causes in both extremely rare diseases and common but heterogeneous …

[HTML][HTML] Next-generation sequencing: impact of exome sequencing in characterizing Mendelian disorders

B Rabbani, N Mahdieh, K Hosomichi… - Journal of human …, 2012 - nature.com
Traditional approaches for gene mapping from candidate gene studies to positional cloning
strategies have been applied for Mendelian disorders. Since 2005, next-generation …

[HTML][HTML] Deep phenotyping on electronic health records facilitates genetic diagnosis by clinical exomes

JH Son, G Xie, C Yuan, L Ena, Z Li, A Goldstein… - The American Journal of …, 2018 - cell.com
Integration of detailed phenotype information with genetic data is well established to
facilitate accurate diagnosis of hereditary disorders. As a rich source of phenotype …

Good laboratory practice for clinical next-generation sequencing informatics pipelines

AS Gargis, L Kalman, DP Bick, C Da Silva… - Nature …, 2015 - nature.com
We report principles and guidelines (Supplementary Note) that were developed by the Next-
Generation Sequencing: Standardization of Clinical Testing II (Nex-StoCT II) informatics …

Genetic causes of amyotrophic lateral sclerosis: new genetic analysis methodologies entailing new opportunities and challenges

G Marangi, BJ Traynor - Brain research, 2015 - Elsevier
The genetic architecture of amyotrophic lateral sclerosis (ALS) is being increasingly
understood. In this far-reaching review, we examine what is currently known about ALS …

Digenic inheritance in medical genetics

AA Schäffer - Journal of medical genetics, 2013 - jmg.bmj.com
Digenic inheritance (DI) is the simplest form of inheritance for genetically complex diseases.
By contrast with the thousands of reports that mutations in single genes cause human …

[HTML][HTML] Homozygous and hemizygous CNV detection from exome sequencing data in a Mendelian disease cohort

T Gambin, ZC Akdemir, B Yuan, S Gu… - Nucleic acids …, 2017 - academic.oup.com
We developed an algorithm, HMZDelFinder, that uses whole exome sequencing (WES) data
to identify rare and intragenic homozygous and hemizygous (HMZ) deletions that may …

[HTML][HTML] Phenotype-driven strategies for exome prioritization of human Mendelian disease genes

D Smedley, PN Robinson - Genome medicine, 2015 - Springer
Whole exome sequencing has altered the way in which rare diseases are diagnosed and
disease genes identified. Hundreds of novel disease-associated genes have been …

Clinical exome sequencing—mistakes and caveats

J Corominas, SP Smeekens, MR Nelen… - Human …, 2022 - Wiley Online Library
Massive parallel sequencing technology has become the predominant technique for genetic
diagnostics and research. Many genetic laboratories have wrestled with the challenges of …