Regulation by 3′-untranslated regions

C Mayr - Annual review of genetics, 2017 - annualreviews.org
3′-untranslated regions (3′-UTRs) are the noncoding parts of mRNAs. Compared to
yeast, in humans, median 3′-UTR length has expanded approximately tenfold alongside …

High-throughput functional genomics using CRISPR–Cas9

O Shalem, NE Sanjana, F Zhang - Nature Reviews Genetics, 2015 - nature.com
Forward genetic screens are powerful tools for the discovery and functional annotation of
genetic elements. Recently, the RNA-guided CRISPR (clustered regularly interspaced short …

Pervasive chromatin-RNA binding protein interactions enable RNA-based regulation of transcription

R Xiao, JY Chen, Z Liang, D Luo, G Chen, ZJ Lu… - Cell, 2019 - cell.com
Increasing evidence suggests that transcriptional control and chromatin activities at large
involve regulatory RNAs, which likely enlist specific RNA-binding proteins (RBPs). Although …

[HTML][HTML] Real-time imaging of translation on single mRNA transcripts in live cells

C Wang, B Han, R Zhou, X Zhuang - Cell, 2016 - cell.com
Translation is under tight spatial and temporal controls to ensure protein production in the
right time and place in cells. Methods that allow real-time, high-resolution visualization of …

Non-invasive measurement of mRNA decay reveals translation initiation as the major determinant of mRNA stability

LY Chan, CF Mugler, S Heinrich, P Vallotton, K Weis - Elife, 2018 - elifesciences.org
The cytoplasmic abundance of mRNAs is strictly controlled through a balance of production
and degradation. Whereas the control of mRNA synthesis through transcription has been …

The clothes make the mRNA: past and present trends in mRNP fashion

G Singh, G Pratt, GW Yeo… - Annual review of …, 2015 - annualreviews.org
Throughout their lifetimes, messenger RNAs (mRNAs) associate with proteins to form
ribonucleoproteins (mRNPs). Since the discovery of the first mRNP component more than 40 …

NMD: a multifaceted response to premature translational termination

S Kervestin, A Jacobson - Nature reviews Molecular cell biology, 2012 - nature.com
Although most mRNA molecules derived from protein-coding genes are destined to be
translated into functional polypeptides, some are eliminated by cellular quality control …

How cells get the message: dynamic assembly and function of mRNA–protein complexes

M Müller-McNicoll, KM Neugebauer - Nature Reviews Genetics, 2013 - nature.com
Abstract mRNA is packaged into ribonucleoprotein particles called mRNPs. A multitude of
RNA-binding proteins as well as a host of associated proteins participate in the fate of …

RNA Degradation in Saccharomyces cerevisae

R Parker - Genetics, 2012 - academic.oup.com
All RNA species in yeast cells are subject to turnover. Work over the past 20 years has
defined degradation mechanisms for messenger RNAs, transfer RNAs, ribosomal RNAs …

[HTML][HTML] Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis

G Haimovich, DA Medina, SZ Causse, M Garber… - Cell, 2013 - cell.com
Maintaining proper mRNA levels is a key aspect in the regulation of gene expression. The
balance between mRNA synthesis and decay determines these levels. We demonstrate that …