[HTML][HTML] REFMAKER: Make your own reference to target nuclear loci in low coverage genome skimming libraries. Phylogenomic application in Sapotaceae
Genome skimming approach is widely used in plant systematics to infer phylogenies mostly
from organelle genomes. However, organelles represent only 10% of the produced libraries …
from organelle genomes. However, organelles represent only 10% of the produced libraries …
[HTML][HTML] Repetitive Sequence Barcode Probe for Karyotype Analysis in Tripidium arundinaceum
J Chai, L Luo, Z Yu, J Lei, M Zhang, Z Deng - International Journal of …, 2022 - mdpi.com
The barcode probe is a convenient and efficient tool for molecular cytogenetics. Tripidium
arundinaceum, as a polyploid wild allied genus of Saccharum, is a useful genetic resource …
arundinaceum, as a polyploid wild allied genus of Saccharum, is a useful genetic resource …
LOCOLOTIVE PIPELINE
U Lautenschlager, A Scheunert - Applications in Plant …, 2023 - search.proquest.com
Methods and Results Target sequences used for probe design are filtered based on an
assembled reference genome, resulting in presumably intron-containing single-copy loci as …
assembled reference genome, resulting in presumably intron-containing single-copy loci as …
An Evolutionary Framework of Acanthaceae Based on Transcriptomes and Genome Skims
JD Arias, E Manzitto-Tripp, CA Kiel… - Systematic …, 2022 - ingentaconnect.com
Acanthaceae is a family of tropical flowering plants with approximately 4900 species.
Despite remarkable variation in morphological traits, research on patterns of character …
Despite remarkable variation in morphological traits, research on patterns of character …
Botany and Taxonomy of Tea (Camellia sinensis, Theaceae) and Its Relatives
DW Zhao - The Tea Plant Genome, 2024 - Springer
Abstract Tea plants, Camellia sect. Thea (Theaceae), are popular beverage sources
worldwide. Camellia sect. Longissima is treated as a new heterotypic synonym of sect. Thea …
worldwide. Camellia sect. Longissima is treated as a new heterotypic synonym of sect. Thea …
Resolving Relationships of Bolbitis sinensis Species Complex Using RAD Sequencing
Species identification and phylogenetic relationships clarification are fundamental goals in
species delimitation. Yet these tasks pose challenges when based on morphologies …
species delimitation. Yet these tasks pose challenges when based on morphologies …
[PDF][PDF] Hybrid capture resolves the phylogeny of Tetradium (Rutaceae) and supports the inclusion of a species from Sulawesi
Tetradium, a genus within Rutaceae, comprises nine species found in Eastern and
Southeastern Asia, distinguished by their opposite pinnate leaves and apocarpous or …
Southeastern Asia, distinguished by their opposite pinnate leaves and apocarpous or …
[HTML][HTML] Effectiveness of Two Universal Angiosperm Probe Sets Tested In Silico for Caryophyllids Taxa with Emphasis on Cacti Species
DA Chincoya, S Solórzano - Genes, 2022 - mdpi.com
In angiosperms, huge advances in massive DNA sequencing technologies have impacted
phylogenetic studies. Probe sets have been developed with the purpose of recovering …
phylogenetic studies. Probe sets have been developed with the purpose of recovering …
Species delimitation of North American Nyssa species
YT Yang, XC Yang, MC Wang, LL Zhong… - … of Systematics and …, 2022 - Wiley Online Library
The development of next‐generation sequencing technologies allows researchers to
address complex problems in species delimitation, especially for non‐model organisms. The …
address complex problems in species delimitation, especially for non‐model organisms. The …
Modern Approaches for Transcriptome Analyses in Plants
DM Riaño-Pachón, HF Espitia-Navarro… - Advances in Plant Omics …, 2022 - Springer
The collection of all transcripts in a cell, a tissue, or an organism is called the transcriptome,
or meta-transcriptome when dealing with the transcripts of a community of different …
or meta-transcriptome when dealing with the transcripts of a community of different …