[HTML][HTML] Genome-wide identification and molecular evolution of NAC gene family in Dendrobium nobile

C Fu, MY Liu - Frontiers in Plant Science, 2023 - frontiersin.org
NAC transcription factors are an important genes that regulate plant growth and
development, and can regulate functions such as fruit ripening in plants. Based on genome …

Comparative analysis of codon usage patterns in chloroplast genomes of ten Epimedium species

Y Wang, D Jiang, K Guo, L Zhao, F Meng, J Xiao… - BMC genomic data, 2023 - Springer
Abstract Background The Phenomenon of codon usage bias exists in the genomes of
prokaryotes and eukaryotes. The codon usage pattern is affected by environmental factors …

Genome-wide identification and molecular evolution of Dof gene family in Camellia oleifera

C Fu, YJ Xiao, N Jiang, YJ Yang - BMC genomics, 2024 - Springer
DNA binding with one finger (Dof) gene family is a class of transcription factors which play
an important role on plant growth and development. Genome-wide identification results …

Comprehensive Analysis of Codon Usage in Quercus Chloroplast Genome and Focus on psbA Gene

SL Shi, YQ Liu, RX Xia, L Qin - Genes, 2022 - mdpi.com
Quercus (oak) is an important economic and ecological tree species in the world, and it is
the necessary feed for oak silkworm feeding. Chloroplasts play an important role in green …

Comparative and phylogenetic analysis of the complete chloroplast genomes of Uncaria (Rubiaceae) species

J Dai, Q Liu, X Xu, Z Tan, Y Lin, X Gao… - Frontiers in Plant …, 2023 - frontiersin.org
The genus Uncaria is famous for its high medicinal value. However, the high morphological
similarities and unclear interspecific genetic relationships have posed challenges to the …

Twelve newly assembled jasmine chloroplast genomes: unveiling genomic diversity, phylogenetic relationships and evolutionary patterns among Oleaceae and …

X Xu, H Huang, S Lin, L Zhou, Y Yi, E Lin, L Feng… - BMC Plant …, 2024 - Springer
Jasmine (Jasminum), renowned for its ornamental value and captivating fragrance, has
given rise to numerous species and accessions. However, limited knowledge exists …

Plastid genome data provide new insights into the dynamic evolution of the tribe Ampelopsideae (Vitaceae)

L Zhang, Y Meng, D Wang, GH He, JM Zhang, J Wen… - BMC genomics, 2024 - Springer
Abstract Background Ampelopsideae J. Wen & ZL Nie is a small-sized tribe of Vitaceae
Juss., including ca. 47 species from four genera showing a disjunct distribution worldwide …

白羊草叶绿体基因组密码子使用偏好性分析.

高守舆, 李钰莹, 杨志青, 董宽虎… - Acta Prataculturae …, 2023 - search.ebscohost.com
叶绿体基因组具有高度的保守性和较慢的进化速率, 研究叶绿体基因组密码子偏好性可以明确
基因表达效率, 确定植物系统发育和物种进化. 为解析白羊草及其近缘种的系统发育关系 …

Codon usage profiling of chloroplast genome in Juglandaceae

Y Zeng, L Shen, S Chen, S Qu, N Hou - Forests, 2023 - mdpi.com
Juglandaceae (walnut) is made up of several economically and ecologically valuable tree
species. Chloroplasts, vitally important for plant growth, are also a rich source of genetic and …

Codon usage analyses reveal the evolutionary patterns among plastid genes of Saxifragales at a larger-sampling scale

D Bi, S Han, J Zhou, M Zhao, S Zhang, X Kan - Genes, 2023 - mdpi.com
Saxifragales is a 15-family order of early-divergent Eudicots with a rich morphological
diversity and an ancient rapid radiation. Codon usage bias (CUB) analyses have emerged …