Phylogenomics and the flowering plant tree of life

C Guo, Y Luo, LM Gao, TS Yi, HT Li… - Journal of Integrative …, 2023 - Wiley Online Library
The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

Deep reticulation: the long legacy of hybridization in vascular plant evolution

GW Stull, KK Pham, PS Soltis, DE Soltis - The Plant Journal, 2023 - Wiley Online Library
Hybridization has long been recognized as a fundamental evolutionary process in plants
but, until recently, our understanding of its phylogenetic distribution and biological …

Plastid phylogenomic insights into relationships of all flowering plant families

HT Li, Y Luo, L Gan, PF Ma, LM Gao, JB Yang, J Cai… - BMC biology, 2021 - Springer
Background Flowering plants (angiosperms) are dominant components of global terrestrial
ecosystems, but phylogenetic relationships at the familial level and above remain only …

A worldwide phylogenetic classification of the Poaceae (Gramineae) III: An update

RJ Soreng, PM Peterson, FO Zuloaga… - … of Systematics and …, 2022 - Wiley Online Library
We present an updated worldwide phylogenetic classification of Poaceae with 11 783
species in 12 subfamilies, 7 supertribes, 54 tribes, 5 super subtribes, 109 subtribes, and 789 …

Phylogenomics and the rise of the angiosperms

AR Zuntini, T Carruthers, O Maurin, PC Bailey… - Nature, 2024 - nature.com
Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods,. A
robust understanding of angiosperm evolution is required to explain their rise to ecological …

A new classification of Cyperaceae (Poales) supported by phylogenomic data

I Larridon, AR Zuntini, É Léveillé‐Bourret… - … of Systematics and …, 2021 - Wiley Online Library
Cyperaceae (sedges) are the third largest monocot family and are of considerable economic
and ecological importance. Sedges represent an ideal model family to study evolutionary …

A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set

O Maurin, A Anest, S Bellot, E Biffin… - American Journal of …, 2021 - Wiley Online Library
Premise To further advance the understanding of the species‐rich, economically and
ecologically important angiosperm order Myrtales in the rosid clade, comprising nine …

[PDF][PDF] Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset

KP Hendriks, C Kiefer, IA Al-Shehbaz, CD Bailey… - Current biology, 2023 - cell.com
The mustard family (Brassicaceae) is a scientifically and economically important family,
containing the model plant Arabidopsis thaliana and numerous crop species that feed …

Global analysis of Poales diversification–parallel evolution in space and time into open and closed habitats

TL Elliott, D Spalink, I Larridon, AR Zuntini… - New …, 2024 - Wiley Online Library
Poales are one of the most species‐rich, ecologically and economically important orders of
plants and often characterise open habitats, enabled by unique suites of traits. We test six …

Easy353: a tool to get Angiosperms353 genes for phylogenomic research

Z Zhang, P Xie, Y Guo, W Zhou, E Liu… - Molecular Biology and …, 2022 - academic.oup.com
The Angiosperms353 gene set (AGS) consists of a set of 353 universal low-copy nuclear
genes that were selected by examining more than 600 angiosperm species. These genes …