Plastid phylogenomics of the Eriostemon group (Rutaceae; Zanthoxyloideae): support for major clades and investigation of a backbone polytomy

HK Orel, TGB McLay, WC Neal… - Australian Systematic …, 2023 - CSIRO Publishing
Most of Australia's sclerophyllous Rutaceae belong to a clade informally known as the
'Eriostemon group'(including 16 genera,~ 209 species). We investigated generic …

Draft genome assemblies for two species of Escallonia (Escalloniales)

AS Chanderbali, C Dervinis, IG Anghel, DE Soltis… - BMC Genomic …, 2024 - Springer
Abstract Objectives Escallonia (Escalloniaceae) belongs to the Escalloniales, a diverse
clade of flowering plants with unclear placement in the tree of life. Escallonia species show …

Classification of the Celastrales Based on Integration of Genomic, Morphological, and Sanger-Sequence Characters

MP Simmons, JA Lombardi, L Biral - Systematic Botany, 2023 - ingentaconnect.com
We present the best sampled phylogenetic analysis of Celastrales, with respect to both
character and taxon sampling, and use it to present a natural classification of the order …

[HTML][HTML]  Preliminary checklist of the genus Festuca L.(Loliinae, Pooideae, Poaceae) in the Altai Mountains with outlines for further studies

PD Gudkova, EA Kriuchkova, AI Shmakov, M Nobis - PhytoKeys, 2023 - ncbi.nlm.nih.gov
 Abstract Here we present an updated checklist of the genus Festuca in the Altai Mountains
(AM). The study was carried out on the abundant herbarium material and considered the …

[HTML][HTML] A highly contiguous, scaffold-level nuclear genome assembly for the fever tree (Cinchona pubescens Vahl) as a novel resource for Rubiaceae research

NA Canales, OA Pérez-Escobar, RF Powell, M Töpel… - GigaByte, 2022 - ncbi.nlm.nih.gov
Abstract The Andean fever tree (Cinchona L.; Rubiaceae) is a source of bioactive quinine
alkaloids used to treat malaria. C. pubescens Vahl is a valuable cash crop within its native …

hybpiper-rbgv and yang-and-smith-rbgv: Containerization and additional options for assembly and paralog detection in target enrichment data

C Jackson, T McLay, AN Schmidt-Lebuhn - BioRxiv, 2021 - biorxiv.org
ABSTRACT PREMISE The HybPiper pipeline has become one of the most widely used tools
for the assembly of target enrichment (sequence capture) data for phylogenomic analysis …

Integrating genomic sequencing resources: an innovative perspective on recycling with universal Angiosperms353 probe sets

X Wang, T Xiong, Y Wang, X Zhang, M Sun - Horticulture Advances, 2024 - Springer
Sequencing strategies have continually advanced, with high-throughput sequencing (HTS)
technologies emerging as pivotal tools in plant phylogenomics. As a standard form of target …

Phylogeny and infrageneric classification of Clerodendrum (Lamiaceae)

J Satthaphorn, AJ Paton, AR Zuntini… - Botanical Journal of …, 2024 - academic.oup.com
The infrageneric classification of the genus Clerodendrum (Lamiaceae) has been highly
problematic due to different concepts and subdivisions being applied to the treatment of …

Bush Blitz collections and iNaturalist observations assist the recognition of a new species from New South Wales, Lomandra briggsiana (Asparagaceae)

RL Barrett, TC Wlson - Telopea, 2023 - openjournals.library.sydney.edu.au
A new species of Lomandra Labill., Lomandra briggsiana RL Barrett & TC Wilson, is
described from the Great Dividing Range and Western Slopes of New South Wales. The …

From southern Africa and beyond: Historical biogeography of a monocotyledonous bulbous geophyte

CC Howard, L Nanyeni, N Mollel… - Journal of …, 2023 - Wiley Online Library
Aim Low taxon sampling and taxonomic uncertainties still obscure our evolutionary
knowledge of many taxa, especially widespread lineages across diverse landscapes. Of …