[HTML][HTML] Chemical probes and inhibitors of bromodomains outside the BET family

M Moustakim, PGK Clark, DA Hay, DJ Dixon… - …, 2016 - pubs.rsc.org
In the last five years, the development of inhibitors of bromodomains has emerged as an
area of intensive worldwide research. Emerging evidence has implicated a number of non …

A small-molecule inhibitor of Lin28

M Roos, U Pradère, RP Ngondo, A Behera… - ACS chemical …, 2016 - ACS Publications
New discoveries in RNA biology underscore a need for chemical tools to clarify their roles in
pathophysiological mechanisms. In certain cancers, synthesis of the let-7 microRNA tumor …

[HTML][HTML] Potent and selective bivalent inhibitors of BET bromodomains

MJ Waring, H Chen, AA Rabow, G Walker… - Nature chemical …, 2016 - nature.com
Proteins of the bromodomain and extraterminal (BET) family, in particular bromodomain-
containing protein 4 (BRD4), are of great interest as biological targets. BET proteins contain …

Discovery of Benzo[cd]indol-2(1H)-ones and Pyrrolo[4,3,2-de]quinolin-2(1H)-ones as Bromodomain and Extra-Terminal Domain (BET) Inhibitors with Selectivity for …

F Jiang, Q Hu, Z Zhang, H Li, H Li… - Journal of medicinal …, 2019 - ACS Publications
The bromodomain and extra-terminal domain (BET) family of proteins are readers which
specifically recognize histone-acetylated lysine residues. Each BET bromodomain protein …

Discovery of CREBBP bromodomain inhibitors by high-throughput docking and hit optimization guided by molecular dynamics

M Xu, A Unzue, J Dong, D Spiliotopoulos… - Journal of medicinal …, 2016 - ACS Publications
We have identified two chemotypes of CREBBP bromodomain ligands by fragment-based
high-throughput docking. Only 17 molecules from the original library of two-million …

Fragment-based design of selective nanomolar ligands of the CREBBP bromodomain

A Unzue, M Xu, J Dong, L Wiedmer… - Journal of medicinal …, 2016 - ACS Publications
Novel ligands of the CREBBP bromodomain were identified by fragment-based docking.
The in silico discovered hits have been optimized by chemical synthesis into selective …

The “gatekeeper” residue influences the mode of binding of acetyl indoles to bromodomains

A Unzue, H Zhao, G Lolli, J Dong, J Zhu… - Journal of Medicinal …, 2016 - ACS Publications
Small-molecule hits for the bromodomains of CREBBP and BAZ2B have been identified by
scaffold hopping followed by docking of a set of∼ 200 compounds containing the acetyl …

Chemical space expansion of bromodomain ligands guided by in silico virtual couplings (AutoCouple)

L Batiste, A Unzue, A Dolbois, F Hassler… - ACS central …, 2018 - ACS Publications
Expanding the chemical space and simultaneously ensuring synthetic accessibility is of
upmost importance, not only for the discovery of effective binders for novel protein classes …

Development of chemical probes for the bromodomains of BRD7 and BRD9

PGK Clark, DJ Dixon, PE Brennan - Drug Discovery Today: Technologies, 2016 - Elsevier
The bromodomain family of proteins are 'readers' of acetylated lysines of histones, a key
mark in the epigenetic code of gene regulation. Without high quality chemical probes with …

Twenty crystal structures of bromodomain and PHD finger containing protein 1 (BRPF1)/ligand complexes reveal conserved binding motifs and rare interactions

J Zhu, A Caflisch - Journal of medicinal chemistry, 2016 - ACS Publications
BRPF1 plays a scaffolding role in transcription. We report on fragment screening by high-
throughput docking to the BRPF1 bromodomain which resulted in six chemotypes with very …