Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases

OK Tørresen, B Star, P Mier… - Nucleic acids …, 2019 - academic.oup.com
The widespread occurrence of repetitive stretches of DNA in genomes of organisms across
the tree of life imposes fundamental challenges for sequencing, genome assembly, and …

Electrochemical methods for the analysis of clinically relevant biomolecules

M Labib, EH Sargent, SO Kelley - Chemical reviews, 2016 - ACS Publications
Rapid progress in identifying biomarkers that are hallmarks of disease has increased
demand for high-performance detection technologies. Implementation of electrochemical …

Predicting the mutations generated by repair of Cas9-induced double-strand breaks

F Allen, L Crepaldi, C Alsinet, AJ Strong… - Nature …, 2019 - nature.com
The DNA mutation produced by cellular repair of a CRISPR–Cas9-generated double-strand
break determines its phenotypic effect. It is known that the mutational outcomes are not …

Microsatellites, from molecules to populations and back

P Jarne, PJL Lagoda - Trends in ecology & evolution, 1996 - cell.com
H istory sometimes takes ironical twists, and the history of science is no exception.
Microsatellites have been detected in eukaryote genomes for over 15 years, though they …

[图书][B] DNA fingerprinting in plants: principles, methods, and applications

K Weising, H Nybom, M Pfenninger, K Wolff, G Kahl - 2005 - taylorfrancis.com
Given the explosive development of new molecular marker techniques over the last decade,
newcomers and experts alike in the field of DNA fingerprinting will find an easy-to-follow …

Characterization and functional implications of the RNA binding properties of nuclear factor TDP-43, a novel splicing regulator ofCFTR exon 9

E Buratti, FE Baralle - Journal of Biological Chemistry, 2001 - ASBMB
Variations in a polymorphic (TG) m sequence near exon 9 of the human CFTR gene have
been associated with variable proportions of exon skipping and occurrence of disease. We …

[图书][B] Chromatin: structure and function

A Wolffe - 1998 - books.google.com
The Third Edition of Chromatin: Structure and Function brings the reader up-to-date with the
remarkable progress in chromatin research over the past three years. It has been …

Microsatellite mutations in the germline:: implications for evolutionary inference

H Ellegren - Trends in genetics, 2000 - cell.com
Microsatellite DNA sequences mutate at rates several orders of magnitude higher than that
of the bulk of DNA. Such high rates mean that spontaneous mutations that form new-length …

Nearest-Neighbor Thermodynamics and NMR of DNA Sequences with Internal A⊙ A, C⊙ C, G⊙ G, and T⊙ T Mismatches

N Peyret, PA Seneviratne, HT Allawi, J SantaLucia - Biochemistry, 1999 - ACS Publications
Thermodynamic measurements are reported for 51 DNA duplexes with A⊙ A, C⊙ C, G⊙ G,
and T⊙ T single mismatches in all possible Watson− Crick contexts. These measurements …

Simple sequence repeats as a source of quantitative genetic variation

Y Kashi, D King, M Soller - Trends in genetics, 1997 - cell.com
Most traits in biological populations appear to be under stabilizing selection, which acts to
eliminate quantitative genetic variation. Yet, virtually all measured traits in biological …