[HTML][HTML] Next generation and other sequencing technologies in diagnostic microbiology and infectious diseases

EE Hilt, P Ferrieri - Genes, 2022 - mdpi.com
Next-generation sequencing (NGS) technologies have become increasingly available for
use in the clinical microbiology diagnostic environment. There are three main applications of …

Epidemiology of community-acquired and recurrent Clostridioides difficile infection

Y Fu, Y Luo, AM Grinspan - Therapeutic advances in …, 2021 - journals.sagepub.com
Clostridioides difficile infection is a leading cause of healthcare-associated infections with
significant morbidity and mortality. For the past decade, the bulk of infection prevention and …

Assembly of the exosporium layer in Clostridioides difficile spores

D Paredes-Sabja, F Cid-Rojas… - Current Opinion in …, 2022 - Elsevier
Clostridioides difficile is a Gram-positive, spore-forming obligate anaerobe and a major
threat to the healthcare system world-wide. Because of its strict anaerobic requirements, the …

Clostridioides difficile ribotypes 001 and 126 were predominant in Tehran healthcare settings from 2004 to 2018: a 14-year-long cross-sectional study

M Azimirad, M Krutova, A Yadegar… - Emerging microbes & …, 2020 - Taylor & Francis
Clostridioides difficile infection (CDI) remains a major healthcare problem worldwide,
however, little is known about CDI epidemiology in Iran. Between December 2004 and …

[HTML][HTML] Characterization of healthcare-associated and community-associated Clostridioides difficile infections among adults, Canada, 2015–2019

T Du, KB Choi, A Silva, GR Golding… - Emerging Infectious …, 2022 - ncbi.nlm.nih.gov
We investigated epidemiologic and molecular characteristics of healthcare-associated (HA)
and community-associated (CA) Clostridioides difficile infection (CDI) among adult patients …

[HTML][HTML] Characterization of community-acquired Clostridioides difficile strains in Israel, 2020–2022

O Schwartz, H Rohana, M Azrad, A Shor… - Frontiers in …, 2023 - frontiersin.org
Background The prevalence of community-acquired Clostridioides difficile infection (CA-
CDI) has been rising, due to changes in antibiotics prescribing practices, emergence of …

Clostridioides difficile resistance to antibiotics, including post-COVID-19 data

L Boyanova, G Dimitrov, R Gergova… - Expert Review of …, 2023 - Taylor & Francis
ABSTRACT Introduction Updating data on Clostridioides difficile antibiotic resistance is
important for treatment improvement of C. difficile infections (CDIs). Areas covered Results …

[HTML][HTML] Novel and emerging sources of Clostridioides difficile infection

NA Turner, BA Smith, SS Lewis - PLoS pathogens, 2019 - journals.plos.org
Clostridioides difficile causes more healthcare-associated infections in the United States
than any other pathogen, with an estimated 500,000 infections and 29,000 deaths per year …

NGSocomial infections: high-resolution views of hospital-acquired infections through genomic epidemiology

AL Greninger, DM Zerr - Journal of the Pediatric Infectious …, 2021 - academic.oup.com
Hospital outbreak investigations are high-stakes epidemiology. Contacts between staff and
patients are numerous; environmental and community exposures are plentiful; and patients …

[HTML][HTML] Gut microbiota features associated with Clostridioides difficile colonization in puppies

ASF Berry, BJ Kelly, D Barnhart, DJ Kelly, DP Beiting… - PloS one, 2019 - journals.plos.org
In people, colonization with Clostridioides difficile, the leading cause of antibiotic-associated
diarrhea, has been shown to be associated with distinct gut microbial features, including …