Gene Balance Predicts Transcriptional Responses Immediately Following Ploidy Change in Arabidopsis thaliana

MJ Song, BI Potter, JJ Doyle, JE Coate - The Plant Cell, 2020 - academic.oup.com
The gene balance hypothesis postulates that there is selection on gene copy number (gene
dosage) to preserve the stoichiometric balance among interacting proteins. This …

Gene expression dominance in allopolyploids: hypotheses and models

S Bottani, NR Zabet, JF Wendel, RA Veitia - Trends in Plant Science, 2018 - cell.com
The classical example of nonadditive contributions of the two parents to allopolyploids is
nucleolar dominance, which entails silencing of one parental set of ribosomal RNA genes …

Recombination and large structural variations shape interspecific edible bananas genomes

FC Baurens, G Martin, C Hervouet… - Molecular biology …, 2019 - academic.oup.com
Admixture and polyploidization are major recognized eukaryotic genome evolutionary
processes. Their impacts on genome dynamics vary among systems and are still partially …

Neutral theory, transposable elements, and eukaryotic genome evolution

IR Arkhipova - Molecular biology and evolution, 2018 - academic.oup.com
Among the multitude of papers published yearly in scientific journals, precious few
publications may be worth looking back in half a century to appreciate the significance of the …

A target capture-based method to estimate ploidy from herbarium specimens

J Viruel, M Conejero, O Hidalgo, L Pokorny… - Frontiers in Plant …, 2019 - frontiersin.org
Whole genome duplication (WGD) events are common in many plant lineages, but the
ploidy status and possible occurrence of intraspecific ploidy variation are unknown for most …

Cultivar-dependent phenotypic and chemotypic responses of drug-type Cannabis sativa L. to polyploidization

HP Fernandes, YH Choi, K Vrieling… - Frontiers in Plant …, 2023 - frontiersin.org
Cannabis sativa L. is a plant with a wide range of potential medicinal applications. In recent
years, polyploidy has gained attention as a potential strategy for rapidly improving C. sativa …

The heterogeneity in the landscape of gene dominance in maize is accompanied by unique chromatin environments

L Yin, G Xu, J Yang, M Zhao - Molecular Biology and Evolution, 2022 - academic.oup.com
Subgenome dominance after whole-genome duplication (WGD) has been observed in many
plant species. However, the degree to which the chromatin environment affects this bias has …

Repeat-based phylogenomics shed light on unclear relationships in the monocentric genus Juncus L.(Juncaceae)

Y Mata-Sucre, W Matzenauer, N Castro… - Molecular Phylogenetics …, 2023 - Elsevier
The repetitive fraction (repeatome) of eukaryotic genomes is diverse and usually fast
evolving, being an important tool for clarify plant systematics. The genus Juncus L …

Knockout of phytoene desaturase gene using CRISPR/Cas9 in highbush blueberry

G Vaia, V Pavese, A Moglia, V Cristofori… - Frontiers in Plant …, 2022 - frontiersin.org
Among the New Plant Breeding Techniques (NPBTs), the CRISPR/Cas9 system represents
a useful tool for target gene editing, improving the traits of the plants rapidly. This technology …

Cistrans controls and regulatory novelty accompanying allopolyploidization

G Hu, JF Wendel - New Phytologist, 2019 - Wiley Online Library
Allopolyploidy is a prevalent process in plants, having important physiological, ecological
and evolutionary consequences. Transcriptomic responses to genomic merger and doubling …