[HTML][HTML] Interferon-γ induces tumor resistance to anti-PD-1 immunotherapy by promoting YAP phase separation

M Yu, Z Peng, M Qin, Y Liu, J Wang, C Zhang, J Lin… - Molecular cell, 2021 - cell.com
Summary Interferon-γ (IFN-γ)-mediated adaptive resistance is one major barrier to improving
immunotherapy in solid tumors. However, the mechanisms are not completely understood …

Chromatin domains: the unit of chromosome organization

JR Dixon, DU Gorkin, B Ren - Molecular cell, 2016 - cell.com
How eukaryotic chromosomes fold inside the nucleus is an age-old question that remains
unanswered today. Early biochemical and microscopic studies revealed the existence of …

[HTML][HTML] 3D chromatin structures of mature gametes and structural reprogramming during mammalian embryogenesis

Y Ke, Y Xu, X Chen, S Feng, Z Liu, Y Sun, X Yao, F Li… - Cell, 2017 - cell.com
High-order chromatin structure plays important roles in gene expression regulation.
Knowledge of the dynamics of 3D chromatin structures during mammalian embryo …

Born to run: control of transcription elongation by RNA polymerase II

FX Chen, ER Smith, A Shilatifard - Nature reviews Molecular cell …, 2018 - nature.com
The dynamic regulation of transcription elongation by RNA polymerase II (Pol II) is an
integral part of the implementation of gene expression programmes during development. In …

Allelic reprogramming of 3D chromatin architecture during early mammalian development

Z Du, H Zheng, B Huang, R Ma, J Wu, X Zhang, J He… - Nature, 2017 - nature.com
In mammals, chromatin organization undergoes drastic reprogramming after fertilization.
However, the three-dimensional structure of chromatin and its reprogramming in …

Th17 cell induction by adhesion of microbes to intestinal epithelial cells

K Atarashi, T Tanoue, M Ando, N Kamada, Y Nagano… - Cell, 2015 - cell.com
Intestinal Th17 cells are induced and accumulate in response to colonization with a
subgroup of intestinal microbes such as segmented filamentous bacteria (SFB) and certain …

Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos

X Liu, C Wang, W Liu, J Li, C Li, X Kou, J Chen, Y Zhao… - Nature, 2016 - nature.com
Histone modifications have critical roles in regulating the expression of developmental
genes during embryo development in mammals,. However, genome-wide analyses of …

Context-specific Polycomb mechanisms in development

JJ Kim, RE Kingston - Nature Reviews Genetics, 2022 - nature.com
Polycomb group (PcG) proteins are crucial chromatin regulators that maintain repression of
lineage-inappropriate genes and are therefore required for stable cell fate. Recent advances …

CTCF and cohesin regulate chromatin loop stability with distinct dynamics

AS Hansen, I Pustova, C Cattoglio, R Tjian, X Darzacq - elife, 2017 - elifesciences.org
Folding of mammalian genomes into spatial domains is critical for gene regulation. The
insulator protein CTCF and cohesin control domain location by folding domains into loop …

Single-cell nuclear architecture across cell types in the mouse brain

Y Takei, S Zheng, J Yun, S Shah, N Pierson, J White… - Science, 2021 - science.org
Diverse cell types in tissues have distinct gene expression programs, chromatin states, and
nuclear architectures. To correlate such multimodal information across thousands of single …