A review on applications of plant network biology to understand the drought stress response in economically important cereal crops

RR Thanmalagan, A Jayaprakash, A Roy… - Plant Gene, 2022 - Elsevier
Cereals have evolved various tolerance mechanisms to cope with the drought environment.
Understanding the drought tolerance mechanism of cereal crops at the molecular level …

Insights and advances in integrating multi-omic approaches for potato crop improvement

A Boutsika, G Tanou, A Xanthopoulou, M Samiotaki… - Scientia …, 2022 - Elsevier
In the forthcoming era of climate change and degradation of culturable land, there is an
urgent need to secure global food supply in a sustainable manner. unraveling the genetic …

[HTML][HTML] StCoExpNet: a global co-expression network analysis facilitates identifying genes underlying agronomic traits in potatoes

VS Bonthala, B Stich - Plant Cell Reports, 2024 - Springer
Potato (Solanum tuberosum L.) is the world's most crucial non-cereal food crop and ranks
third in food production after wheat and rice. Despite the availability of several potato …

[HTML][HTML] Salt stress induces differentiated nitrogen uptake and antioxidant responses in two contrasting barley landraces from MENA region

FE Ben Azaiez, S Ayadi, G Capasso, S Landi… - Agronomy, 2020 - mdpi.com
The interaction between salinity and nitrogen metabolism has been investigated in two
barley landraces, one tolerant (“100/1B”) and one susceptible to salinity (“Barley medenine”) …

[HTML][HTML] Korean naked waxy barley (saechalssal) extract reduces blood glucose in diabetic mice by modulating the PI3K-Akt-GSK3β pathway

JR Ham, YJ Son, Y Lee, HJ Lee, J Yeo, MJ Lee… - Biomedicine & …, 2022 - Elsevier
Saechalssal barley is Korea's representative naked waxy barley. This study investigated the
anti-diabetic effect of the extract derived from saechalssal and its mechanism. The prethanol …

[HTML][HTML] Unleashing the power within short-read RNA-seq for plant research: Beyond differential expression analysis and toward regulomics

M Tu, J Zeng, J Zhang, G Fan, G Song - Frontiers in Plant Science, 2022 - frontiersin.org
RNA-seq has become a state-of-the-art technique for transcriptomic studies. Advances in
both RNA-seq techniques and the corresponding analysis tools and pipelines have …

Genome Editing‐accelerated Re‐Domestication (GEaReD)–A new major direction in plant breeding

T Hanak, CK Madsen… - Biotechnology …, 2022 - Wiley Online Library
Background The effects of climate change, soil depletion, a growing world population putting
pressure on food safety and security are major challenges for agriculture in the 21st century …

[HTML][HTML] Wild and traditional barley genomic resources as a tool for abiotic stress tolerance and biotic relations

G Capasso, G Santini, M Petraretti, S Esposito, S Landi - Agriculture, 2021 - mdpi.com
Barley (Hordeum vulgare L.) is one of the main crops cultivated all over the world. As for
other cereals, throughout the centuries barley was subjected by human breeding to genetic …

PlantNexus: a gene co-expression network database and visualization tool for barley and sorghum

Y Zhou, A Sukul, JW Mishler-Elmore… - Plant and Cell …, 2022 - academic.oup.com
Global gene co-expression networks (GCNs) are powerful tools for functional genomics
whereby putative functions and regulatory mechanisms can be inferred by gene co …

[HTML][HTML] Barley seeds miRNome stability during long-term storage and aging

M Puchta, J Groszyk, M Małecka, MD Koter… - International Journal of …, 2021 - mdpi.com
Seed aging is a complex biological process that has been attracting scientists' attention for
many years. High-throughput small RNA sequencing was applied to examine microRNAs …