Precise gene replacement in plants through CRISPR/Cas genome editing technology: current status and future perspectives

S Li, L Xia - Abiotech, 2020 - Springer
CRISPR/Cas, as a simple, versatile, robust and cost-effective system for genome
manipulation, has dominated the genome editing field over the past few years. The …

Functional analysis tools for post‐translational modification: a post‐translational modification database for analysis of proteins and metabolic pathways

ER Cruz, H Nguyen, T Nguyen, IS Wallace - The Plant Journal, 2019 - Wiley Online Library
Post‐translational modifications (PTMs) are critical regulators of protein function, and nearly
200 different types of PTM have been identified. Advances in high‐resolution mass …

[HTML][HTML] Widespread epistasis among beneficial genetic variants revealed by high-throughput genome editing

RML Ang, SAA Chen, AF Kern, Y Xie, HB Fraser - Cell Genomics, 2023 - cell.com
The phenotypic effect of any genetic variant can be altered by variation at other genomic
loci. Known as epistasis, these genetic interactions shape the genotype-phenotype map of …

Unlocking nature's biosynthetic potential by directed genome evolution

M Cao, VG Tran, H Zhao - Current Opinion in Biotechnology, 2020 - Elsevier
Highlights•Directed genome evolution is a powerful tool to unlock microbial biosynthetic
potential.•Adaptive laboratory evolution is a traditional but efficient tool to improve cell …

[HTML][HTML] DNA variants affecting the expression of numerous genes in trans have diverse mechanisms of action and evolutionary histories

S Lutz, C Brion, M Kliebhan, FW Albert - PLoS Genetics, 2019 - journals.plos.org
DNA variants that alter gene expression contribute to variation in many phenotypic traits. In
particular, trans-acting variants, which are often located on different chromosomes from the …

Genetic interaction mapping informs integrative structure determination of protein complexes

H Braberg, I Echeverria, S Bohn, P Cimermancic… - Science, 2020 - science.org
INTRODUCTION Determining the structures of protein complexes is crucial for
understanding cellular functions. Here, we describe an integrative structure determination …

Synthetic biology of yeast

Z Liu, Y Zhang, J Nielsen - Biochemistry, 2019 - ACS Publications
With the rapid development of DNA synthesis and next-generation sequencing, synthetic
biology that aims to standardize, modularize, and innovate cellular functions, has achieved …

[PDF][PDF] Genetic variation in phenotypic plasticity

I Goldstein, IM Ehrenreich - Phenotypic Plasticity and Evolution, 2021 - library.oapen.org
Most traits of human interest vary among individuals within a population due to a
combination of genetic and environmental factors, meaning individuals' phenotypes will …

Establishment of genomic library technology mediated by non-homologous end joining mechanism in Yarrowia lipolytica

Q Bai, S Cheng, J Zhang, M Li, Y Cao… - Science China Life …, 2021 - Springer
Genomic variants libraries are conducive to obtain dominant strains with desirable
phenotypic traits. The non-homologous end joining (NHEJ), which enables foreign DNA …

Progress in Gene Editing and Metabolic Regulation of Saccharomyces cerevisiae with CRISPR/Cas9 Tools

Y Liang, S Gao, X Qi, LN Valentovich… - ACS Synthetic …, 2024 - ACS Publications
The CRISPR/Cas9 systems have been developed as tools for genetic engineering and
metabolic engineering in various organisms. In this review, various aspects of CRISPR/Cas9 …