Is early-onset cancer an emerging global epidemic? Current evidence and future implications

T Ugai, N Sasamoto, HY Lee, M Ando… - Nature Reviews …, 2022 - nature.com
Over the past several decades, the incidence of early-onset cancers, often defined as
cancers diagnosed in adults< 50 years of age, in the breast, colorectum, endometrium …

Structural variations in cancer and the 3D genome

F Dubois, N Sidiropoulos, J Weischenfeldt… - Nature Reviews …, 2022 - nature.com
Structural variations (SVs) affect more of the cancer genome than any other type of somatic
genetic alteration but difficulties in detecting and interpreting them have limited our …

Accurate and efficient detection of gene fusions from RNA sequencing data

S Uhrig, J Ellermann, T Walther, P Burkhardt… - Genome …, 2021 - genome.cshlp.org
The identification of gene fusions from RNA sequencing data is a routine task in cancer
research and precision oncology. However, despite the availability of many computational …

The DNA methylation landscape of advanced prostate cancer

SG Zhao, WS Chen, H Li, A Foye, M Zhang… - Nature …, 2020 - nature.com
Although DNA methylation is a key regulator of gene expression, the comprehensive
methylation landscape of metastatic cancer has never been defined. Through whole …

[HTML][HTML] Integrated omics of metastatic colorectal cancer

C Li, YD Sun, GY Yu, JR Cui, Z Lou, H Zhang, Y Huang… - Cancer cell, 2020 - cell.com
We integrate the genomics, proteomics, and phosphoproteomics of 480 clinical tissues from
146 patients in a Chinese colorectal cancer (CRC) cohort, among which 70 had metastatic …

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

P Razavi, BT Li, DN Brown, B Jung, E Hubbell… - Nature medicine, 2019 - nature.com
Accurate identification of tumor-derived somatic variants in plasma circulating cell-free DNA
(cfDNA) requires understanding of the various biological compartments contributing to the …

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

SC Dentro, I Leshchiner, K Haase, M Tarabichi… - Cell, 2021 - cell.com
Intra-tumor heterogeneity (ITH) is a mechanism of therapeutic resistance and therefore an
important clinical challenge. However, the extent, origin, and drivers of ITH across cancer …

Estimation of tumor cell total mRNA expression in 15 cancer types predicts disease progression

S Cao, JR Wang, S Ji, P Yang, Y Dai, S Guo… - Nature …, 2022 - nature.com
Single-cell RNA sequencing studies have suggested that total mRNA content correlates with
tumor phenotypes. Technical and analytical challenges, however, have so far impeded at …

Cancer the 'RBP'eutics–RNA-binding proteins as therapeutic targets for cancer

S Mohibi, X Chen, J Zhang - Pharmacology & therapeutics, 2019 - Elsevier
RNA-binding proteins (RBPs) play a critical role in the regulation of various RNA processes,
including splicing, cleavage and polyadenylation, transport, translation and degradation of …

Age-associated differences in the cancer molecular landscape

K Chatsirisupachai, C Lagger, JP de Magalhães - Trends in cancer, 2022 - cell.com
Cancer is an age-related disease, as incidence and mortality for most types of cancer
increase with age. However, how molecular alterations in tumors differ among patients of …