The expanding diagnostic toolbox for rare genetic diseases
KD Kernohan, KM Boycott - Nature Reviews Genetics, 2024 - nature.com
Genomic technologies, such as targeted, exome and short-read genome sequencing
approaches, have revolutionized the care of patients with rare genetic diseases. However …
approaches, have revolutionized the care of patients with rare genetic diseases. However …
SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks
C Bravo González-Blas, S De Winter, G Hulselmans… - Nature …, 2023 - nature.com
Joint profiling of chromatin accessibility and gene expression in individual cells provides an
opportunity to decipher enhancer-driven gene regulatory networks (GRNs). Here we present …
opportunity to decipher enhancer-driven gene regulatory networks (GRNs). Here we present …
Tissue-Specific Regulation of CFTR Gene Expression
C Blotas, C Férec, S Moisan - International Journal of Molecular Sciences, 2023 - mdpi.com
More than 2000 variations are described within the CFTR (Cystic Fibrosis Transmembrane
Regulator) gene and related to large clinical issues from cystic fibrosis to mono-organ …
Regulator) gene and related to large clinical issues from cystic fibrosis to mono-organ …
Increased enhancer–promoter interactions during developmental enhancer activation in mammals
Remote enhancers are thought to interact with their target promoters via physical proximity,
yet the importance of this proximity for enhancer function remains unclear. Here we …
yet the importance of this proximity for enhancer function remains unclear. Here we …
[HTML][HTML] Systematic decoding of cis gene regulation defines context-dependent control of the multi-gene costimulatory receptor locus in human T cells
Cis-regulatory elements (CREs) interact with trans regulators to orchestrate gene
expression, but how transcriptional regulation is coordinated in multi-gene loci has not been …
expression, but how transcriptional regulation is coordinated in multi-gene loci has not been …
[HTML][HTML] An encyclopedia of enhancer-gene regulatory interactions in the human genome
AR Gschwind, KS Mualim, A Karbalayghareh… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Identifying transcriptional enhancers and their target genes is essential for understanding
gene regulation and the impact of human genetic variation on disease 1–6. Here we create …
gene regulation and the impact of human genetic variation on disease 1–6. Here we create …
Advances in the multimodal analysis of the 3D chromatin structure and gene regulation
Recent studies have demonstrated that the three-dimensional conformation of the chromatin
plays a crucial role in gene regulation, with aberrations potentially leading to various …
plays a crucial role in gene regulation, with aberrations potentially leading to various …
Differential Gene Expression in Activated Microglia Treated with Adenosine A2A Receptor Antagonists Highlights Olfactory Receptor 56 and T-Cell Activation GTPase …
Microglial activation often accompanies the plastic changes occurring in the brain of patients
with neurodegenerative diseases. A2A and A3 adenosine receptors have been proposed as …
with neurodegenerative diseases. A2A and A3 adenosine receptors have been proposed as …
A novel GATA2 distal enhancer mutation results in MonoMAC syndrome in 2 second cousins
RR West, TR Bauer Jr, LM Tuschong… - Blood …, 2023 - ashpublications.org
Mutations in the transcription factor GATA2 can cause MonoMAC syndrome, a GATA2
deficiency disease characterized by several findings, including disseminated …
deficiency disease characterized by several findings, including disseminated …
[HTML][HTML] A multi-omics atlas of the human retina at single-cell resolution
Cell classes in the human retina are highly heterogeneous with their abundance varying by
several orders of magnitude. Here, we generated and integrated a multi-omics single-cell …
several orders of magnitude. Here, we generated and integrated a multi-omics single-cell …