Utilizing graph machine learning within drug discovery and development

T Gaudelet, B Day, AR Jamasb, J Soman… - Briefings in …, 2021 - academic.oup.com
Graph machine learning (GML) is receiving growing interest within the pharmaceutical and
biotechnology industries for its ability to model biomolecular structures, the functional …

Concepts of artificial intelligence for computer-assisted drug discovery

X Yang, Y Wang, R Byrne, G Schneider… - Chemical …, 2019 - ACS Publications
Artificial intelligence (AI), and, in particular, deep learning as a subcategory of AI, provides
opportunities for the discovery and development of innovative drugs. Various machine …

Highly multiplexed single-cell analysis of formalin-fixed, paraffin-embedded cancer tissue

MJ Gerdes, CJ Sevinsky, A Sood… - Proceedings of the …, 2013 - National Acad Sciences
Limitations on the number of unique protein and DNA molecules that can be characterized
microscopically in a single tissue specimen impede advances in understanding the …

The growing role of precision and personalized medicine for cancer treatment

P Krzyszczyk, A Acevedo, EJ Davidoff, LM Timmins… - Technology, 2018 - World Scientific
Cancer is a devastating disease that takes the lives of hundreds of thousands of people
every year. Due to disease heterogeneity, standard treatments, such as chemotherapy or …

Animal models of human disease: challenges in enabling translation

P McGonigle, B Ruggeri - Biochemical pharmacology, 2014 - Elsevier
Animal models have historically played a critical role in the exploration and characterization
of disease pathophysiology, target identification, and in the in vivo evaluation of novel …

In silico ADME/T modelling for rational drug design

Y Wang, J Xing, Y Xu, N Zhou, J Peng… - Quarterly reviews of …, 2015 - cambridge.org
In recent decades, in silico absorption, distribution, metabolism, excretion (ADME), and
toxicity (T) modelling as a tool for rational drug design has received considerable attention …

Dynamic real-time imaging of living cell traction force by piezo-phototronic light nano-antenna array

Q Zheng, M Peng, Z Liu, S Li, R Han, H Ouyang… - Science …, 2021 - science.org
Dynamic mapping of the cell-generated force of cardiomyocytes will help provide an intrinsic
understanding of the heart. However, a real-time, dynamic, and high-resolution mapping of …

Phenotypic screens as a renewed approach for drug discovery

W Zheng, N Thorne, JC McKew - Drug discovery today, 2013 - Elsevier
Highlights•Phenotypic screening is a renewed approach for lead discovery.•Phenotypic
screen approach may improve the success rate of drug approval.•New drug targets can be …

Towards reproducible computational drug discovery

N Schaduangrat, S Lampa, S Simeon… - Journal of …, 2020 - Springer
The reproducibility of experiments has been a long standing impediment for further scientific
progress. Computational methods have been instrumental in drug discovery efforts owing to …

The third dimension bridges the gap between cell culture and live tissue

F Pampaloni, EG Reynaud, EHK Stelzer - Nature reviews Molecular …, 2007 - nature.com
Moving from cell monolayers to three-dimensional (3D) cultures is motivated by the need to
work with cellular models that mimic the functions of living tissues. Essential cellular …