Advances in chemical and biological methods to identify microorganisms—from past to present

R Franco-Duarte, L Černáková, S Kadam, K S. Kaushik… - Microorganisms, 2019 - mdpi.com
Fast detection and identification of microorganisms is a challenging and significant feature
from industry to medicine. Standard approaches are known to be very time-consuming and …

The Phylogeny, Biodiversity, and Ecology of the Chloroflexi in Activated Sludge

LBM Speirs, DTF Rice, S Petrovski… - Frontiers in …, 2019 - frontiersin.org
It is now clear that several of the filamentous bacteria in activated sludge wastewater
treatment plants globally, are members of the phylum Chloroflexi. They appear to be more …

Understanding, monitoring, and controlling biofilm growth in drinking water distribution systems

S Liu, C Gunawan, N Barraud, SA Rice… - … science & technology, 2016 - ACS Publications
In drinking water distribution systems (DWDS), biofilms are the predominant mode of
microbial growth, with the presence of extracellular polymeric substance (EPS) protecting …

Single-cell analysis tools for drug discovery and development

JR Heath, A Ribas, PS Mischel - Nature reviews Drug discovery, 2016 - nature.com
The genetic, functional or compositional heterogeneity of healthy and diseased tissues
presents major challenges in drug discovery and development. Such heterogeneity hinders …

Comparison of two 16S rRNA primers (V3–V4 and V4–V5) for studies of arctic microbial communities

E Fadeev, MG Cardozo-Mino, JZ Rapp… - Frontiers in …, 2021 - frontiersin.org
Microbial communities of the Arctic Ocean are poorly characterized in comparison to other
aquatic environments as to their horizontal, vertical, and temporal turnover. Yet, recent …

Biodegradation of polymeric mulch films in agricultural soils: concepts, knowledge gaps, and future research directions

M Sander - Environmental science & technology, 2019 - ACS Publications
The agricultural use of conventional, polyethylene-based mulch films leads to the
accumulation of remnant film pieces in agricultural soils with negative impacts for soil …

Heterogeneity of breast cancer: The importance of interaction between different tumor cell populations

I Januškevičienė, V Petrikaitė - Life sciences, 2019 - Elsevier
Introduction Breast cancer is the most common cancer and the second leading cause of
cancer-related death in women worldwide. Despite the early detection of breast cancer and …

A review of root exudates and rhizosphere microbiome for crop production

H Sun, S Jiang, C Jiang, C Wu, M Gao… - … Science and Pollution …, 2021 - Springer
Increasing crop yields and ensuring food security is a major global challenge. In order to
increase crop production, chemical fertilizers and pesticides are excessively used. However …

Absolute quantification of microbial taxon abundances

R Props, FM Kerckhof, P Rubbens, J De Vrieze… - The ISME …, 2017 - academic.oup.com
High-throughput amplicon sequencing has become a well-established approach for
microbial community profiling. Correlating shifts in the relative abundances of bacterial taxa …

Genomics of microbial plasmids: classification and identification based on replication and transfer systems and host taxonomy

M Shintani, ZK Sanchez, K Kimbara - Frontiers in microbiology, 2015 - frontiersin.org
Plasmids are important “vehicles” for the communication of genetic information between
bacteria. The exchange of plasmids transmits pathogenically and environmentally relevant …