Respiratory syncytial virus: infection, detection, and new options for prevention and treatment

C Griffiths, SJ Drews, DJ Marchant - Clinical microbiology reviews, 2017 - Am Soc Microbiol
Respiratory syncytial virus (RSV) infection is a significant cause of hospitalization of children
in North America and one of the leading causes of death of infants less than 1 year of age …

[HTML][HTML] Metagenomics next-generation sequencing tests take the stage in the diagnosis of lower respiratory tract infections

Z Diao, D Han, R Zhang, J Li - Journal of advanced research, 2022 - Elsevier
Background Metagenomic next-generation sequencing (mNGS) has changed the diagnosis
landscape of lower respiratory tract infections (LRIs). With the development of newer …

Clinical and epidemiological characteristics of a fatal case of avian influenza A H10N8 virus infection: a descriptive study

HY Chen, H Yuan, R Gao, J Zhang, D Wang, Y Xiong… - The Lancet, 2014 - thelancet.com
Background Human infections with different avian influenza viruses—eg, H5N1, H9N2, and
H7N9—have raised concerns about pandemic potential worldwide. We report the first …

[HTML][HTML] Next-generation sequencing diagnostics of bacteremia in septic patients

S Grumaz, P Stevens, C Grumaz, SO Decker… - Genome medicine, 2016 - Springer
Background Bloodstream infections remain one of the major challenges in intensive care
units, leading to sepsis or even septic shock in many cases. Due to the lack of timely …

Deciphering the bat virome catalog to better understand the ecological diversity of bat viruses and the bat origin of emerging infectious diseases

Z Wu, LI Yang, X Ren, G He, J Zhang, J Yang… - The ISME …, 2016 - academic.oup.com
Abstract Studies have demonstrated that~ 60%–80% of emerging infectious diseases (EIDs)
in humans originated from wild life. Bats are natural reservoirs of a large variety of viruses …

[HTML][HTML] The phylogenomics of evolving virus virulence

JL Geoghegan, EC Holmes - Nature Reviews Genetics, 2018 - nature.com
How virulence evolves after a virus jumps to a new host species is central to disease
emergence. Our current understanding of virulence evolution is based on insights drawn …

[HTML][HTML] Accuracy of next generation sequencing platforms

EJ Fox, KS Reid-Bayliss, MJ Emond… - Next generation …, 2014 - ncbi.nlm.nih.gov
Next-generation DNA sequencing has revolutionized genomic studies and is driving the
implementation of precision diagnostics. The ability of these technologies to disentangle …

[HTML][HTML] Comparative analysis of rodent and small mammal viromes to better understand the wildlife origin of emerging infectious diseases

Z Wu, L Lu, J Du, L Yang, X Ren, B Liu, J Jiang, J Yang… - Microbiome, 2018 - Springer
Background Rodents represent around 43% of all mammalian species, are widely
distributed, and are the natural reservoirs of a diverse group of zoonotic viruses, including …

Going viral: next-generation sequencing applied to phage populations in the human gut

A Reyes, NP Semenkovich, K Whiteson… - Nature Reviews …, 2012 - nature.com
Over the past decade, researchers have begun to characterize viral diversity using
metagenomic methods. These studies have shown that viruses, the majority of which infect …

[HTML][HTML] Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human …

S Bikel, A Valdez-Lara, F Cornejo-Granados… - Computational and …, 2015 - Elsevier
The advances in experimental methods and the development of high performance
bioinformatic tools have substantially improved our understanding of microbial communities …