[HTML][HTML] Transposable elements and genome size variations in plants

SI Lee, NS Kim - Genomics & informatics, 2014 - ncbi.nlm.nih.gov
Although the number of protein-coding genes is not highly variable between plant taxa, the
DNA content in their genomes is highly variable, by as much as 2,056-fold from a 1C amount …

LTR-retrotransposons and MITEs: important players in the evolution of plant genomes

SR Wessler, TE Bureau, SE White - Current opinion in genetics & …, 1995 - Elsevier
Retrotransposons are an abundant and ancient component of plant genomes, yet recent
evidence indicates that element activity in many modern plants is restricted to times of stress …

Long-read sequence assembly: a technical evaluation in barley

M Mascher, T Wicker, J Jenkins, C Plott, T Lux… - The Plant …, 2021 - academic.oup.com
Sequence assembly of large and repeat-rich plant genomes has been challenging,
requiring substantial computational resources and often several complementary sequence …

[图书][B] DNA fingerprinting in plants: principles, methods, and applications

K Weising, H Nybom, M Pfenninger, K Wolff, G Kahl - 2005 - taylorfrancis.com
Given the explosive development of new molecular marker techniques over the last decade,
newcomers and experts alike in the field of DNA fingerprinting will find an easy-to-follow …

IRAP and REMAP: two new retrotransposon-based DNA fingerprinting techniques

R Kalendar, T Grob, M Regina, A Suoniemi… - Theoretical and Applied …, 1999 - Springer
The BARE-1 retrotransposon is an active, dispersed, and highly abundant component of the
genome of barley (Hordeum vulgare) and other species in its genus. Like all …

[图书][B] Introduction to plant biotechnology (3/e)

HS Chawla - 2011 - taylorfrancis.com
This book has been written to meet the needs of students for biotechnology courses at
various levels of undergraduate and graduate studies. This book covers all the important …

Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence

R Kalendar, J Tanskanen, S Immonen… - Proceedings of the …, 2000 - National Acad Sciences
The replicative spread of retrotransposons in the genome creates new insertional
polymorphisms, increasing retrotransposon numbers and potentially both their share of the …

Genetic distribution of Bare–1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)

R Waugh, K McLean, AJ Flavell, SR Pearce… - Molecular and General …, 1997 - Springer
Retrotransposons are present in high copy number in many plant genomes. They show a
considerable degree of sequence heterogeneity and insertional polymorphism, both within …

Computational and experimental characterization of physically clustered simple sequence repeats in plants

L Cardle, L Ramsay, D Milbourne, M Macaulay… - Genetics, 2000 - academic.oup.com
The type and frequency of simple sequence repeats (SSRs) in plant genomes was
investigated using the expanding quantity of DNA sequence data deposited in public …

LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model

C Vitte, O Panaud - Cytogenetic and genome research, 2005 - karger.com
Abstract Long Terminal Repeat (LTR) retrotransposons are ubiquitous components of plant
genomes. Because of their copy-and-paste mode of transposition, these elements tend to …