N6‐methyladenosine RNA modification regulates cotton drought response in a Ca2+ and ABA‐dependent manner
B Li, M Zhang, W Sun, D Yue, Y Ma… - Plant Biotechnology …, 2023 - Wiley Online Library
Summary N6‐methyladenosine (m6A) is the most prevalent internal modification present in
mRNAs, and is considered to participate in a range of developmental and biological …
mRNAs, and is considered to participate in a range of developmental and biological …
Structural insights into target DNA recognition by R2R3-MYB transcription factors
B Wang, Q Luo, Y Li, L Yin, N Zhou, X Li… - Nucleic acids …, 2020 - academic.oup.com
As the largest group of MYB family transcription factors, R2R3-MYB proteins play essential
roles during plant growth and development. However, the structural basis underlying how …
roles during plant growth and development. However, the structural basis underlying how …
[HTML][HTML] A DNA adenine demethylase impairs PRC2-mediated repression of genes marked by a specific chromatin signature
Q Jia, X Zhang, Q Liu, J Li, W Wang, X Ma, B Zhu, S Li… - Genome Biology, 2023 - Springer
Abstract Background The Fe (II)-and α-ketoglutarate-dependent AlkB family dioxygenases
are implicated in nucleotide demethylation. AlkB homolog1 (ALKBH1) is shown to …
are implicated in nucleotide demethylation. AlkB homolog1 (ALKBH1) is shown to …
[PDF][PDF] Identification of a DNA N6-adenine methyltransferase complex and its impact on chromatin organization
LY Beh, GT Debelouchina, DM Clay, RE Thompson… - Cell, 2019 - cell.com
Summary DNA N6-adenine methylation (6mA) has recently been described in diverse
eukaryotes, spanning unicellular organisms to metazoa. Here, we report a DNA 6mA …
eukaryotes, spanning unicellular organisms to metazoa. Here, we report a DNA 6mA …
[HTML][HTML] iDNA6mA-Rice: a computational tool for detecting N6-methyladenine sites in rice
DNA N6-methyladenine (6mA) is a dominant DNA modification form and involved in many
biological functions. The accurate genome-wide identification of 6mA sites may increase …
biological functions. The accurate genome-wide identification of 6mA sites may increase …
Plant synthetic epigenomic engineering for crop improvement
L Yang, P Zhang, Y Wang, G Hu, W Guo, X Gu… - Science China Life …, 2022 - Springer
Efforts have been directed to redesign crops with increased yield, stress adaptability, and
nutritional value through synthetic biology—the application of engineering principles to …
nutritional value through synthetic biology—the application of engineering principles to …
MM-6mAPred: identifying DNA N6-methyladenine sites based on Markov model
Motivation Recent studies have shown that DNA N6-methyladenine (6mA) plays an
important role in epigenetic modification of eukaryotic organisms. It has been found that 6mA …
important role in epigenetic modification of eukaryotic organisms. It has been found that 6mA …
A deep learning approach to automate whole‐genome prediction of diverse epigenomic modifications in plants
Epigenetic modifications function in gene transcription, RNA metabolism, and other
biological processes. However, multiple factors currently limit the scientific utility of …
biological processes. However, multiple factors currently limit the scientific utility of …
On the role of transposable elements in the regulation of gene expression and subgenomic interactions in crop genomes
Transposable elements (TEs) represent a major and variable portion of plant genomes, and
recent progress in genetics and genomics has highlighted the importance of different TE …
recent progress in genetics and genomics has highlighted the importance of different TE …
A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA
Y Mu, L Zhang, J Hu, J Zhou, HW Lin, C He… - Nature Chemical …, 2022 - nature.com
Abstract N 6-methyladenosine (6mA) is a DNA modification that has recently been found to
play regulatory roles during mammalian early embryo development and mitochondrial …
play regulatory roles during mammalian early embryo development and mitochondrial …