Protein analysis by shotgun/bottom-up proteomics

Y Zhang, BR Fonslow, B Shan, MC Baek… - Chemical …, 2013 - ACS Publications
According to Genome Sequencing Project statistics (http://www. ncbi. nlm. nih.
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …

Proteomics beyond trypsin

L Tsiatsiani, AJR Heck - The FEBS journal, 2015 - Wiley Online Library
Peptide‐centered shotgun analysis of proteins has been the core technology in mass
spectrometry based proteomics and has enabled numerous biological discoveries, such as …

Bioactive components from Moringa oleifera seeds: production, functionalities and applications – a critical review

CKO Dzuvor, S Pan, C Amanze, P Amuzu… - Critical Reviews in …, 2022 - Taylor & Francis
A readily distinguishable and indigenous member of the plant kingdom in the Indian
subcontinent is the 'drumstick tree', ie Moringa oleifera Lam. In addition to India, this drought …

Bioanalytical LC–MS/MS of protein-based biopharmaceuticals

I van den Broek, WMA Niessen… - … of Chromatography B, 2013 - Elsevier
Biotechnology increasingly delivers highly promising protein-based biopharmaceutical
candidates to the drug development funnel. For successful biopharmaceutical drug …

[HTML][HTML] Deciphering post-translational modification codes

AP Lothrop, MP Torres, SM Fuchs - FEBS letters, 2013 - Elsevier
Post-translational modifications (PTMs) occur on nearly all proteins. Many domains within
proteins are modified on multiple amino acid sidechains by diverse enzymes to create a …

Toward an optimized workflow for middle-down proteomics

A Cristobal, F Marino, H Post… - Analytical …, 2017 - ACS Publications
Mass spectrometry (MS)-based proteomics workflows can crudely be classified into two
distinct regimes, targeting either relatively small peptides (ie, 0.7 kDa< M w< 3.0 kDa) or …

Unambiguous phosphosite localization using electron-transfer/higher-energy collision dissociation (EThcD)

CK Frese, H Zhou, T Taus, AFM Altelaar… - Journal of proteome …, 2013 - ACS Publications
We recently introduced a novel scheme combining electron-transfer and higher-energy
collision dissociation (termed EThcD), for improved peptide ion fragmentation and …

Challenges and advances in the fabrication of monolithic bioseparation materials and their applications in proteomics research

S Ma, Y Li, C Ma, Y Wang, J Ou, M Ye - Advanced Materials, 2019 - Wiley Online Library
High‐performance liquid chromatography integrated with tandem mass spectrometry (HPLC–
MS/MS) has become a powerful technique for proteomics research. Its performance heavily …

[HTML][HTML] Review of three-dimensional liquid chromatography platforms for bottom-up proteomics

VA Duong, JM Park, H Lee - International Journal of Molecular Sciences, 2020 - mdpi.com
Proteomics is a large-scale study of proteins, aiming at the description and characterization
of all expressed proteins in biological systems. The expressed proteins are typically highly …

Proteomics turns functional

C Monti, M Zilocchi, I Colugnat, T Alberio - Journal of proteomics, 2019 - Elsevier
Proteomics is acquiring a pivotal role in the comprehensive understanding of human
biology. Biochemical processes involved in complex diseases, such as neurodegenerative …