Extracellular matrix-based biomaterial scaffolds and the host response
JM Aamodt, DW Grainger - Biomaterials, 2016 - Elsevier
Extracellular matrix (ECM) collectively represents a class of naturally derived proteinaceous
biomaterials purified from harvested organs and tissues with increasing scientific focus and …
biomaterials purified from harvested organs and tissues with increasing scientific focus and …
Protein analysis by shotgun/bottom-up proteomics
According to Genome Sequencing Project statistics (http://www. ncbi. nlm. nih.
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
gov/genomes/static/gpstat. html), as of February 16, 2012, complete gene sequences have …
Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
C Vogel, EM Marcotte - Nature reviews genetics, 2012 - nature.com
Recent advances in next-generation DNA sequencing and proteomics provide an
unprecedented ability to survey mRNA and protein abundances. Such proteome-wide …
unprecedented ability to survey mRNA and protein abundances. Such proteome-wide …
Quantitative proteomics: challenges and opportunities in basic and applied research
In this Perspective, we discuss developments in mass-spectrometry-based proteomic
technology over the past decade from the viewpoint of our laboratory. We also reflect on …
technology over the past decade from the viewpoint of our laboratory. We also reflect on …
Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present
M Bantscheff, S Lemeer, MM Savitski… - Analytical and bioanalytical …, 2012 - Springer
Mass-spectrometry-based proteomics is continuing to make major contributions to the
discovery of fundamental biological processes and, more recently, has also developed into …
discovery of fundamental biological processes and, more recently, has also developed into …
Parallel reaction monitoring: a targeted experiment performed using high resolution and high mass accuracy mass spectrometry
N Rauniyar - International journal of molecular sciences, 2015 - mdpi.com
The parallel reaction monitoring (PRM) assay has emerged as an alternative method of
targeted quantification. The PRM assay is performed in a high resolution and high mass …
targeted quantification. The PRM assay is performed in a high resolution and high mass …
[HTML][HTML] Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution
Biological tissues exhibit complex spatial heterogeneity that directs the functions of
multicellular organisms. Quantifying protein expression is essential for elucidating …
multicellular organisms. Quantifying protein expression is essential for elucidating …
[HTML][HTML] Human SRMAtlas: a resource of targeted assays to quantify the complete human proteome
U Kusebauch, DS Campbell, EW Deutsch, CS Chu… - Cell, 2016 - cell.com
The ability to reliably and reproducibly measure any protein of the human proteome in any
tissue or cell type would be transformative for understanding systems-level properties as …
tissue or cell type would be transformative for understanding systems-level properties as …
MaxQuant enables high peptide identification rates, individualized ppb-range mass accuracies and proteome-wide protein quantification
Efficient analysis of very large amounts of raw data for peptide identification and protein
quantification is a principal challenge in mass spectrometry (MS)-based proteomics. Here …
quantification is a principal challenge in mass spectrometry (MS)-based proteomics. Here …
[HTML][HTML] Definitions of terms relating to mass spectrometry (IUPAC Recommendations 2013)
KK Murray, RK Boyd, MN Eberlin… - Pure and Applied …, 2013 - degruyter.com
This document contains recommendations for terminology in mass spectrometry.
Development of standard terms dates back to 1974 when the IUPAC Commission on …
Development of standard terms dates back to 1974 when the IUPAC Commission on …