Whole‐genome re‐sequencing reveals the impact of the interaction of copy number variants of the rhg1 and Rhg4 genes on broad‐based resistance to soybean cyst …

GB Patil, N Lakhssassi, J Wan, L Song… - Plant Biotechnology …, 2019 - Wiley Online Library
Soybean cyst nematode (SCN) is the most devastating plant‐parasitic nematode. Most
commercial soybean varieties with SCN resistance are derived from PI 88788. Resistance …

Next‐generation polyploid phylogenetics: Rapid resolution of hybrid polyploid complexes using PacBio single‐molecule sequencing

CJ Rothfels, KM Pryer, FW Li - New Phytologist, 2017 - Wiley Online Library
Difficulties in generating nuclear data for polyploids have impeded phylogenetic study of
these groups. We describe a high‐throughput protocol and an associated bioinformatics …

Flower color as a model system for studies of plant evo-devo

JM Sobel, MA Streisfeld - Frontiers in plant science, 2013 - frontiersin.org
Even though pigmentation traits have had substantial impacts on the field of animal
evolutionary developmental biology, they have played only relatively minor roles in plant …

Genome-wide identification of KCS gene family in Carya illinoinensis and their roles under abiotic stress conditions

H Wang, T He, C Huang, K Wang, D Shi, X Si, Y Xu… - Scientia …, 2023 - Elsevier
Pecan (Carya illinoinensis) is an important economic tree species of genus Carya in the
Juglandaceae. Its nuts are rich in nutrients, becoming one of the consumer's favorite ones …

Genome-Wide Analysis of the Rhododendron AP2/ERF Gene Family: Identification and Expression Profiles in Response to Cold, Salt and Drought Stress

Z Guo, L He, X Sun, C Li, J Su, H Zhou, X Liu - Plants, 2023 - mdpi.com
The AP2/ERF gene family is one of the most conserved and important transcription factor
families mainly occurring in plants with various functions in regulating plant biological and …

Comparative gene retention analysis in barley, wild emmer, and bread wheat pangenome lines reveals factors affecting gene retention following gene duplication

Y Jia, M Xu, H Hu, B Chapman, C Watt, B Buerte… - BMC biology, 2023 - Springer
Background Gene duplication is a prevalent phenomenon and a major driving force
underlying genome evolution. The process leading to the fixation of gene duplicates …

Phenotypic plasticity, canalization, and the origins of novelty: evidence and mechanisms from amphibians

NA Levis, DW Pfennig - Seminars in cell & developmental biology, 2019 - Elsevier
A growing number of biologists have begun asking whether environmentally induced
phenotypic change––'phenotypic plasticity'––precedes and facilitates the origin and …

Comparative genomics profiling revealed multi-stress responsive roles of the CC-NBS-LRR genes in three mango cultivars

M Tahir ul Qamar, M Sadaqat, XT Zhu, H Li… - Frontiers in Plant …, 2023 - frontiersin.org
The nucleotide-binding site-leucine-rich repeat (NBS–LRR) gene family is the largest group
of disease resistance (R) genes in plants and is active in response to viruses, bacteria, and …

Phylogenetics of Camelina Crantz.(Brassicaceae) and insights on the origin of gold-of-pleasure (Camelina sativa)

JR Brock, AA Dönmez, MA Beilstein… - Molecular phylogenetics …, 2018 - Elsevier
Camelina sativa (false flax or gold-of-pleasure) is an Old World oilseed crop that fell out of
use in the mid 20th Century but has recently gained renewed interest as a biofuel source …

The Brassica rapa FLC homologue FLC2 is a key regulator of flowering time, identified through transcriptional co-expression networks

D Xiao, JJ Zhao, XL Hou, RK Basnet… - Journal of …, 2013 - academic.oup.com
The role of many genes and interactions among genes involved in flowering time have been
studied extensively in Arabidopsis, and the purpose of this study was to investigate how …